RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 HRO43593 1189 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 SSBP05455 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
CAPN3-216ENST00000567071 FSHRP23945 695 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 CXCL12P48061 93 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 CLLU1OSQ5K130 101 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 PARM1Q6UWI2 310 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 LONP2Q86WA8 852 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 ECHDC2Q86YB7 292 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 ST13P5Q8NFI4 369 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-216ENST00000567071 GPATCH3Q96I76 525 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 LOXL4Q96JB6 756 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 CDHR1Q96JP9 859 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 PHF20Q9BVI0 1012 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 NDRG2Q9UN36 371 aaKnown RBP11.09□□□□□ -0.63
CAPN3-216ENST00000567071 TELO2Q9Y4R8 837 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 SPTA1P02549 2419 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 F5P12259 2224 aa11.09□□□□□ -0.63
CAPN3-216ENST00000567071 USP9XQ93008 2570 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-216ENST00000567071 HECTD1Q9ULT8 2610 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 CHURC1-FNTBB4DL54 471 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 OPLAHO14841 1288 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 GIPC1O14908 333 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 RFPL2O75678 378 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 URODP06132 367 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 FNTBP49356 437 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 CRYBB1P53674 252 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-216ENST00000567071 AK2P54819 239 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 MRPS9P82933 396 aaKnown RBP11.08□□□□□ -0.64
CAPN3-216ENST00000567071 RNASELQ05823 741 aaKnown RBP11.08□□□□□ -0.64
CAPN3-216ENST00000567071 DSC3Q14574 896 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 PLCB4Q15147 1175 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 COL28A1Q2UY09 1125 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 MTHFD1LQ6UB35 978 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 FAM228AQ86W67 206 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 OTUD7AQ8TE49 926 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-216ENST00000567071 HDAC7Q8WUI4 952 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 TRAPPC12Q8WVT3 735 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 TMEM40Q8WWA1 233 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 MKNK1Q9BUB5 465 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 RPP25Q9BUL9 199 aaKnown RBP11.08□□□□□ -0.64
CAPN3-216ENST00000567071 PLEKHA4Q9H4M7 779 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 JMJD4Q9H9V9 463 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 ZDHHC7Q9NXF8 308 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 CDH7Q9ULB5 785 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 TENM4Q6N022 2769 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 EVPLQ92817 2033 aa11.08□□□□□ -0.64
CAPN3-216ENST00000567071 ACACAQ13085 2346 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 GSTTP1A0A1W2PQM5 241 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 CYSRT1A8MQ03 144 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 TOP3BO95985 862 aaKnown RBP11.07□□□□□ -0.64
CAPN3-216ENST00000567071 CEACAM1P13688 526 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 SRSF5Q13243 272 aaKnown RBP11.07□□□□□ -0.64
CAPN3-216ENST00000567071 CCDC6Q16204 474 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 KIZQ2M2Z5 673 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 SH3PXD2AQ5TCZ1 1133 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 TMEM173Q86WV6 379 aaPredicted RBP11.07□□□□□ -0.64
CAPN3-216ENST00000567071 PROSER1Q86XN7 944 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 PNMA1Q8ND90 353 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 OSMRQ99650 979 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 KAT14Q9H8E8 782 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 MSRB2Q9Y3D2 182 aa11.07□□□□□ -0.64
CAPN3-216ENST00000567071 MTCL1Q9Y4B5 1905 aaKnown RBP11.06□□□□□ -0.64
CAPN3-216ENST00000567071 LAMA5O15230 3695 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 C2CD2LO14523 706 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 EPN2O95208 641 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 FGRP09769 529 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 PARP1P09874 1014 aaKnown RBP11.06□□□□□ -0.64
CAPN3-216ENST00000567071 MYBP10242 640 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
CAPN3-216ENST00000567071 KLRC1P26715 233 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 RDXP35241 583 aaKnown RBP11.06□□□□□ -0.64
CAPN3-216ENST00000567071 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 HEATR6Q6AI08 1181 aaKnown RBP11.06□□□□□ -0.64
CAPN3-216ENST00000567071 ZNF707Q96C28 371 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-216ENST00000567071 EDEM2Q9BV94 578 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 NT5C3AQ9H0P0 336 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 ADAMTS10Q9H324 1103 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 VPS45Q9NRW7 570 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 ECHDC1Q9NTX5 307 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 CACNA2D2Q9NY47 1150 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 PCDHGA5Q9Y5G8 931 aa11.06□□□□□ -0.64
CAPN3-216ENST00000567071 ZBTB5O15062 677 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 GALTP07902 379 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 LAMA1P25391 3075 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 TSHZ3Q63HK5 1081 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 PCNX4Q63HM2 1172 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 KIAA1211LQ6NV74 962 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 GLB1LQ6UWU2 654 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 GPRASP2Q96D09 838 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 BBC3Q96PG8 261 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-216ENST00000567071 PPP1R16BQ96T49 567 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 SEC62Q99442 399 aaKnown RBP11.05□□□□□ -0.64
CAPN3-216ENST00000567071 KXD1Q9BQD3 176 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 GBP3Q9H0R5 595 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 HEBP1Q9NRV9 189 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 DACT1Q9NYF0 836 aa11.05□□□□□ -0.64
CAPN3-216ENST00000567071 ASXL3Q9C0F0 2248 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms