RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CCNT1O60563 726 aaKnown RBP16.78■□□□□ 0.28
RNF40-209ENST00000566703 BAG4O95429 457 aaKnown RBP16.78■□□□□ 0.28
RNF40-209ENST00000566703 CXCL14O95715 111 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 PBX3P40426 434 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 NPEPPSP55786 919 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 NOMO2Q5JPE7 1267 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 PLA2G4FQ68DD2 849 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 SLFN12Q8IYM2 578 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 TCP11Q8WWU5 503 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 PSPC1Q8WXF1 523 aaKnown RBP16.78■□□□□ 0.28
RNF40-209ENST00000566703 HAS1Q92839 578 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 NLRP4Q96MN2 994 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 STK39Q9UEW8 545 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 TPCN1Q9ULQ1 816 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 PIN4Q9Y237 131 aaKnown RBP16.78■□□□□ 0.28
RNF40-209ENST00000566703 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
RNF40-209ENST00000566703 TMEM221A6NGB7 291 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 M0R296 226 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 CLASP2O75122 1294 aaKnown RBP16.77■□□□□ 0.28
RNF40-209ENST00000566703 OFD1O75665 1012 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 GALTP07902 379 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 ITIH3Q06033 890 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 CES5AQ6NT32 575 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 PIK3AP1Q6ZUJ8 805 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 MRPL10Q7Z7H8 261 aaKnown RBP16.77■□□□□ 0.28
RNF40-209ENST00000566703 DDX53Q86TM3 631 aaKnown RBP16.77■□□□□ 0.28
RNF40-209ENST00000566703 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 FBXL18Q96ME1 805 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 NECTIN4Q96NY8 510 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 ADAM7Q9H2U9 754 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 ZSWIM4Q9H7M6 989 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 NRDE2Q9H7Z3 1164 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 AGPAT5Q9NUQ2 364 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 KANSL3Q9P2N6 904 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 ORC3Q9UBD5 711 aaPredicted RBP16.77■□□□□ 0.28
RNF40-209ENST00000566703 HCFC2Q9Y5Z7 792 aa16.77■□□□□ 0.28
RNF40-209ENST00000566703 NT5C1B-RDH14C9J2C7 533 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 CTSAP10619 480 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 YWHABP31946 246 aaKnown RBP16.76■□□□□ 0.27
RNF40-209ENST00000566703 PCBP1Q15365 356 aaKnown RBP eCLIP16.76■□□□□ 0.27
RNF40-209ENST00000566703 LLGL2Q6P1M3 1020 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 VPS52Q8N1B4 723 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 CNNM3Q8NE01 707 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 PRPF31Q8WWY3 499 aaKnown RBP16.76■□□□□ 0.27
RNF40-209ENST00000566703 PBXIP1Q96AQ6 731 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 IGSF21Q96ID5 467 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 PRRX2Q99811 253 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 TBC1D13Q9NVG8 400 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 WRAP73Q9P2S5 460 aaPredicted RBP16.76■□□□□ 0.27
RNF40-209ENST00000566703 NR2E1Q9Y466 385 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 PCDHB2Q9Y5E7 798 aa16.76■□□□□ 0.27
RNF40-209ENST00000566703 ZC3H11AO75152 810 aaKnown RBP eCLIP16.75■□□□□ 0.27
RNF40-209ENST00000566703 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 RNASELQ05823 741 aaKnown RBP16.75■□□□□ 0.27
RNF40-209ENST00000566703 SIGLEC14Q08ET2 396 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 ZNF579Q8NAF0 562 aaKnown RBP16.75■□□□□ 0.27
RNF40-209ENST00000566703 TMEM87AQ8NBN3 555 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 OXER1Q8TDS5 423 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 LPPQ93052 612 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 LXNQ9BS40 222 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 ZBP1Q9H171 429 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 BRMS1Q9HCU9 246 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 GJB4Q9NTQ9 266 aa16.75■□□□□ 0.27
RNF40-209ENST00000566703 CNTNAP2Q9UHC6 1331 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 EIF5BO60841 1220 aaKnown RBP16.74■□□□□ 0.27
RNF40-209ENST00000566703 SLITRK3O94933 977 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 ALDH2P05091 517 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 KRT2P35908 639 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 MTHFRP42898 656 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 NHLH1Q02575 133 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 POU5F1BQ06416 359 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 SPIRE1Q08AE8 756 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 MXD4Q14582 209 aaPredicted RBP16.74■□□□□ 0.27
RNF40-209ENST00000566703 PTPN21Q16825 1174 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 AGMOQ6ZNB7 445 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 FERMT3Q86UX7 667 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 PPFIBP1Q86W92 1011 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 URGCPQ8TCY9 931 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 TMEM143Q96AN5 459 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 DYDC2Q96IM9 177 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 TMEM175Q9BSA9 504 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 UBN1Q9NPG3 1134 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 DZANK1Q9NVP4 752 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 RGL1Q9NZL6 768 aa16.74■□□□□ 0.27
RNF40-209ENST00000566703 MEIS3P2A8K0S8 358 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 LYPLA2O95372 231 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 NEFLP07196 543 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 FDPSP14324 419 aaKnown RBP16.73■□□□□ 0.27
RNF40-209ENST00000566703 AXLP30530 894 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 HOXA11P31270 313 aaPredicted RBP16.73■□□□□ 0.27
RNF40-209ENST00000566703 AK2P54819 239 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
RNF40-209ENST00000566703 XKR9Q5GH70 373 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 EARS2Q5JPH6 523 aaKnown RBP16.73■□□□□ 0.27
RNF40-209ENST00000566703 NCAPH2Q6IBW4 605 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
RNF40-209ENST00000566703 IFNLR1Q8IU57 520 aaPredicted RBP16.73■□□□□ 0.27
RNF40-209ENST00000566703 SUGP1Q8IWZ8 645 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms