RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CFAP36Q96G28 342 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 FUBP3Q96I24 572 aaKnown RBP eCLIP3.37□□□□□ -1.87
CHD9-216ENST00000565803 SGCZQ96LD1 299 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TRIM47Q96LD4 638 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 MOGAT1Q96PD6 335 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TSPYL1Q9H0U9 437 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 UNC93B1Q9H1C4 597 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 MMADHCQ9H3L0 296 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 IFT22Q9H7X7 185 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 VTA1Q9NP79 307 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 EIF2B3Q9NR50 452 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 TFCP2L1Q9NZI6 479 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CPSF2Q9P2I0 782 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 CLIP2Q9UDT6 1046 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 FOXD3Q9UJU5 478 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 MTUS1Q9ULD2 1270 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 HPCAL4Q9UM19 191 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 GPR52Q9Y2T5 361 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 EPN1Q9Y6I3 576 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 LTBP2Q14767 1821 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 GOLGA6L3A6NEY3 463 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 MEN1O00255 615 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 BIN1O00499 593 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ERC2O15083 957 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CEP104O60308 925 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 E2F6O75461 281 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TADA3O75528 432 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 STAMBPO95630 424 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 SERPINC1P01008 464 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 PEX2P28328 305 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 PBLDP30039 288 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 POLD2P49005 469 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 SCNN1DP51172 638 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ZNF280AP59817 542 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 KCNC4Q03721 635 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 BNIP1Q12981 228 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CCDC183Q5T5S1 534 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CIAPIN1Q6FI81 312 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 ERMP1Q7Z2K6 904 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CPLX4Q7Z7G2 160 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 PTRH1Q86Y79 214 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 CREG2Q8IUH2 290 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CCDC144CPQ8IYA2 1237 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TAGAPQ8N103 731 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 AHI1Q8N157 1196 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 KCNH5Q8NCM2 988 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 OR2W6PQ8NHA6 318 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 GOT1L1Q8NHS2 421 aaPredicted RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 CALML4Q96GE6 196 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 VPS39Q96JC1 886 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 RIPOR3Q96MK2 946 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 CCDC43Q96MW1 224 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 ACO2Q99798 780 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 SPATA9Q9BWV2 254 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 TRIM7Q9C029 511 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 NCOA5Q9HCD5 579 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 TRMT13Q9NUP7 481 aaKnown RBP3.37□□□□□ -1.87
CHD9-216ENST00000565803 NKIRAS2Q9NYR9 191 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 GGA3Q9NZ52 723 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 COL4A1P02462 1669 aa3.37□□□□□ -1.87
CHD9-216ENST00000565803 IL16Q14005 1332 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 M0R2N6 131 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 TXNL1O43396 289 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PDHBP11177 359 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PCP11498 1178 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 CAP2P40123 477 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 GRK6P43250 576 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SOX9P48436 509 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PRIM2P49643 509 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZNF157P51786 506 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 BLVRAP53004 296 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 GJA9P57773 515 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 NLRP12P59046 1061 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 LRRC74AQ0VAA2 488 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 COASYQ13057 564 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CUL4BQ13620 913 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 KRT72Q14CN4 511 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 RABEP1Q15276 862 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CCDC57Q2TAC2 916 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ERFEQ4G0M1 354 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 WDR44Q5JSH3 913 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 VHLLQ6RSH7 139 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PPP1R21Q6ZMI0 780 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 TRIM67Q6ZTA4 783 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SAPCD2Q86UD0 394 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZNF295-AS1Q8N0V1 137 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 OR8H3Q8N146 312 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 KRT222Q8N1A0 295 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 MIER2Q8N344 545 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 NKAPQ8N5F7 415 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 AVL9Q8NBF6 648 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 DRAXINQ8NBI3 349 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 BBOF1Q8ND07 529 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 KRT35Q92764 455 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 RBM18Q96H35 190 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 WNK4Q96J92 1243 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 C16orf45Q96MC5 204 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 SLC2A13Q96QE2 648 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PPP1R16BQ96T49 567 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SORBS1Q9BX66 1292 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms