RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 CRYBB1P53674 252 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-215ENST00000565559 SPEM2Q0P670 501 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 MTMR1Q13613 665 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 MCMDC2Q4G0Z9 681 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 CYP26C1Q6V0L0 522 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-215ENST00000565559 PLPPR4Q7Z2D5 763 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 FAM228AQ86W67 206 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 TICAM2Q86XR7 235 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 CMASQ8NFW8 434 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-215ENST00000565559 FEZF2Q8TBJ5 459 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 PIGSQ96S52 555 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 UBAC1Q9BSL1 405 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 JPH1Q9HDC5 661 aaPredicted RBP12.7□□□□□ -0.38
CAPN3-215ENST00000565559 WDR6Q9NNW5 1121 aaKnown RBP12.7□□□□□ -0.38
CAPN3-215ENST00000565559 RNF19AQ9NV58 838 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.7□□□□□ -0.38
CAPN3-215ENST00000565559 CACNA1IQ9P0X4 2223 aa12.7□□□□□ -0.38
CAPN3-215ENST00000565559 PNMA6FA0A0J9YX94 578 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 ZNF213O14771 459 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 LRP3O75074 770 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.38
CAPN3-215ENST00000565559 PROS1P07225 676 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 KLRC1P26715 233 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 PMLP29590 882 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 STAT5BP51692 787 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 CLCN4P51793 760 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 SHC2P98077 582 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 DSC3Q14574 896 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 UBXN2BQ14CS0 331 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 KIZQ2M2Z5 673 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 IFIT1BQ5T764 474 aaKnown RBP12.69□□□□□ -0.38
CAPN3-215ENST00000565559 THSD4Q6ZMP0 1018 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 ECHDC2Q86YB7 292 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 HELQQ8TDG4 1101 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 RSPH1Q8WYR4 309 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 OSMRQ99650 979 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 FAM126AQ9BYI3 521 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-215ENST00000565559 OSBPL6Q9BZF3 934 aa12.69□□□□□ -0.38
CAPN3-215ENST00000565559 LOXHD1Q8IVV2 1947 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 DOCK5Q9H7D0 1870 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 MAFGO15525 162 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 FOXD2O60548 495 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-215ENST00000565559 SLC26A2P50443 739 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 CLLU1OSQ5K130 101 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 IL31Q6EBC2 164 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 LAIR1Q6GTX8 287 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 KIAA0319LQ8IZA0 1049 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 EVI5LQ96CN4 794 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 IGSF21Q96ID5 467 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 CCDC136Q96JN2 1154 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 PPP1R16BQ96T49 567 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 PCYT2Q99447 389 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.68□□□□□ -0.38
CAPN3-215ENST00000565559 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
CAPN3-215ENST00000565559 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 FAM170BA6NMN3 283 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 B4E1Z4 1266 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 LAMP2P13473 410 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 PRKCQQ04759 706 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 SNW1Q13573 536 aaKnown RBP12.67□□□□□ -0.38
CAPN3-215ENST00000565559 NELL1Q92832 810 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 KLHL5Q96PQ7 755 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 MYADMQ96S97 322 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 RHOBTB2Q9BYZ6 727 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 PIDD1Q9HB75 910 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 NUMBLQ9Y6R0 609 aa12.67□□□□□ -0.38
CAPN3-215ENST00000565559 A0A0D9SFI3 127 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-215ENST00000565559 NCAM2O15394 837 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 HBP1O60381 514 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 RETP07949 1114 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 ITGB5P18084 799 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 NRLP54845 237 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 MFAP1P55081 439 aaKnown RBP12.66□□□□□ -0.38
CAPN3-215ENST00000565559 HTR4Q13639 388 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 PPP2R5DQ14738 602 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 MLF2Q15773 248 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-215ENST00000565559 ZBTB41Q5SVQ8 909 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 N4BP2L1Q5TBK1 243 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-215ENST00000565559 USP17L6PQ6QN14 398 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 TMEM173Q86WV6 379 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-215ENST00000565559 SMG7Q92540 1137 aaKnown RBP12.66□□□□□ -0.38
CAPN3-215ENST00000565559 PHKBQ93100 1093 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 FAM227BQ96M60 508 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 SDF4Q9BRK5 362 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 MRPL17Q9NRX2 175 aaKnown RBP12.66□□□□□ -0.38
CAPN3-215ENST00000565559 SEMA4GQ9NTN9 838 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 PPP4R2Q9NY27 417 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 COL1A2P08123 1366 aa12.66□□□□□ -0.38
CAPN3-215ENST00000565559 A0A0U1RQF3 1178 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 ANHXE9PGG2 379 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 PIK3CDO00329 1044 aa12.65□□□□□ -0.38
CAPN3-215ENST00000565559 INPPL1O15357 1258 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms