RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 DIS3L2Q8IYB7 885 aaKnown RBP26.55■■□□□ 1.84
RAB40C-209ENST00000565511 SLC7A3Q8WY07 619 aa26.55■■□□□ 1.84
RAB40C-209ENST00000565511 NAP1L4Q99733 375 aaKnown RBP26.55■■□□□ 1.84
RAB40C-209ENST00000565511 AGPAT5Q9NUQ2 364 aa26.55■■□□□ 1.84
RAB40C-209ENST00000565511 MUC6Q6W4X9 2439 aa26.55■■□□□ 1.84
RAB40C-209ENST00000565511 MARCH6O60337 910 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 SLITRK3O94933 977 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 SRGAP2CP0DJJ0 459 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 ALADP13716 330 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 PPM1AP35813 382 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 UBXN11Q5T124 520 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 ERICH6BQ5W0A0 696 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 PDE12Q6L8Q7 609 aaKnown RBP26.54■■□□□ 1.84
RAB40C-209ENST00000565511 RNF135Q8IUD6 432 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 EIF2AK1Q9BQI3 630 aaKnown RBP26.54■■□□□ 1.84
RAB40C-209ENST00000565511 JPH2Q9BR39 696 aaPredicted RBP26.54■■□□□ 1.84
RAB40C-209ENST00000565511 CDH22Q9UJ99 828 aa26.54■■□□□ 1.84
RAB40C-209ENST00000565511 HOXA11P31270 313 aaPredicted RBP26.53■■□□□ 1.84
RAB40C-209ENST00000565511 PLA2G5P39877 138 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 RFC5P40937 340 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 AFF1P51825 1210 aaKnown RBP26.53■■□□□ 1.84
RAB40C-209ENST00000565511 XKR9Q5GH70 373 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 SYCE2Q6PIF2 218 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 SLFN12Q8IYM2 578 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 PSPC1Q8WXF1 523 aaKnown RBP26.53■■□□□ 1.84
RAB40C-209ENST00000565511 SUSD6Q92537 303 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 CDCA3Q99618 268 aaPredicted RBP26.53■■□□□ 1.84
RAB40C-209ENST00000565511 APOL5Q9BWW9 433 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 S1PR5Q9H228 398 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 ZSWIM4Q9H7M6 989 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 NRDE2Q9H7Z3 1164 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 TBC1D13Q9NVG8 400 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 INPP5FQ9Y2H2 1132 aa26.53■■□□□ 1.84
RAB40C-209ENST00000565511 A0A087WWV3 80 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 PRR33A8MZF0 331 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 DKC1O60832 514 aaKnown RBP eCLIP26.52■■□□□ 1.84
RAB40C-209ENST00000565511 ZC3H11AO75152 810 aaKnown RBP eCLIP26.52■■□□□ 1.84
RAB40C-209ENST00000565511 OFD1O75665 1012 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 CALCRLQ16602 461 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 AGMOQ6ZNB7 445 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 FERMT3Q86UX7 667 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 TPH2Q8IWU9 490 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 AUTS2Q8WXX7 1259 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 POP1Q99575 1024 aaKnown RBP26.52■■□□□ 1.84
RAB40C-209ENST00000565511 HSD17B14Q9BPX1 270 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 VN1R3Q9BXE9 311 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 MRPL9Q9BYD2 267 aaKnown RBP26.52■■□□□ 1.84
RAB40C-209ENST00000565511 INO80BQ9C086 356 aaPredicted RBP26.52■■□□□ 1.84
RAB40C-209ENST00000565511 TMEM60Q9H2L4 133 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 BRMS1Q9HCU9 246 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 DNAJB4Q9UDY4 337 aa26.52■■□□□ 1.84
RAB40C-209ENST00000565511 PUF60Q9UHX1 559 aaKnown RBP26.52■■□□□ 1.84
RAB40C-209ENST00000565511 ZNF318Q5VUA4 2279 aa26.51■■□□□ 1.84
RAB40C-209ENST00000565511 C2orf71A6NGG8 1288 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 LOC730098B7Z3J9 87 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 ZNF623O75123 536 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 TECP42680 631 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 GUCY1B3Q02153 619 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 NOMO2Q5JPE7 1267 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 ANKRD54Q6NXT1 300 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 TMEM184AQ6ZMB5 413 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 TMC7Q7Z402 723 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 ASAP3Q8TDY4 903 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 MTMR9Q96QG7 549 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 NGRNQ9NPE2 291 aaKnown RBP26.51■■□□□ 1.83
RAB40C-209ENST00000565511 PPME1Q9Y570 386 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 PCDHB2Q9Y5E7 798 aa26.51■■□□□ 1.83
RAB40C-209ENST00000565511 BAG4O95429 457 aaKnown RBP26.5■■□□□ 1.83
RAB40C-209ENST00000565511 HERC4Q5GLZ8 1057 aaPredicted RBP26.5■■□□□ 1.83
RAB40C-209ENST00000565511 SRGAP1Q7Z6B7 1085 aa26.5■■□□□ 1.83
RAB40C-209ENST00000565511 ZNF280BQ86YH2 543 aa26.5■■□□□ 1.83
RAB40C-209ENST00000565511 RNF149Q8NC42 400 aa26.5■■□□□ 1.83
RAB40C-209ENST00000565511 HCN4Q9Y3Q4 1203 aa26.5■■□□□ 1.83
RAB40C-209ENST00000565511 POTEMA6NI47 508 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 NEMFO60524 1076 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 SLC11A1P49279 550 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 RAB27AP51159 221 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 KRT17Q04695 432 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 GLB1LQ6UWU2 654 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 MRPL43Q8N983 215 aaKnown RBP26.49■■□□□ 1.83
RAB40C-209ENST00000565511 FEZF2Q8TBJ5 459 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 MTRQ99707 1265 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 GBP3Q9H0R5 595 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 ZBP1Q9H171 429 aa26.49■■□□□ 1.83
RAB40C-209ENST00000565511 TTC12Q9H892 705 aaPredicted RBP26.49■■□□□ 1.83
RAB40C-209ENST00000565511 CLASP2O75122 1294 aaKnown RBP26.48■■□□□ 1.83
RAB40C-209ENST00000565511 LYPLA2O95372 231 aa26.48■■□□□ 1.83
RAB40C-209ENST00000565511 GALTP07902 379 aa26.48■■□□□ 1.83
RAB40C-209ENST00000565511 TXKP42681 527 aa26.48■■□□□ 1.83
RAB40C-209ENST00000565511 SMC1AQ14683 1233 aaKnown RBP26.48■■□□□ 1.83
RAB40C-209ENST00000565511 CBX2Q14781 532 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-209ENST00000565511 OTUD6AQ7L8S5 288 aa26.48■■□□□ 1.83
RAB40C-209ENST00000565511 MRPL10Q7Z7H8 261 aaKnown RBP26.48■■□□□ 1.83
RAB40C-209ENST00000565511 CCDC83Q8IWF9 413 aa26.48■■□□□ 1.83
RAB40C-209ENST00000565511 PHF7Q9BWX1 381 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-209ENST00000565511 PCDHA12Q9UN75 941 aa26.48■■□□□ 1.83
RAB40C-209ENST00000565511 HCFC2Q9Y5Z7 792 aa26.48■■□□□ 1.83
RAB40C-209ENST00000565511 DDHD2O94830 711 aa26.47■■□□□ 1.83
RAB40C-209ENST00000565511 SKIP12755 728 aa26.47■■□□□ 1.83
RAB40C-209ENST00000565511 ALDH7A1P49419 539 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms