RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
NSMCE1-208ENST00000565070 ARID2Q68CP9 1835 aa13.9□□□□□ -0.18
NSMCE1-208ENST00000565070 MYADML2A6NDP7 307 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 KBTBD13C9JR72 458 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 TBCAO75347 108 aaKnown RBP13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 GJB1P08034 283 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 MEA1Q16626 185 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 NELFCDQ8IXH7 590 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 DEFB118Q96PH6 123 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 MCOLN1Q9GZU1 580 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 TRPC6Q9Y210 931 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 SIK3Q9Y2K2 1263 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 COL1A2P08123 1366 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 TRIM21P19474 475 aaKnown RBP13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 MARK3P27448 753 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 HOXD13P35453 343 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 ZNF131P52739 623 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 MFSD10Q14728 455 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 KCNA10Q16322 511 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 KNOP1Q1ED39 458 aaKnown RBP13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 XKR9Q5GH70 373 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 CCSAPQ6IQ19 270 aaPredicted RBP13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 ANO5Q75V66 913 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 L2HGDHQ9H9P8 463 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 OGDHLQ9ULD0 1010 aa13.89□□□□□ -0.19
NSMCE1-208ENST00000565070 SCN10AQ9Y5Y9 1956 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 DNM1LO00429 736 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 PDXKO00764 312 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 STBD1O95210 358 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 MYCP01106 439 aaPredicted RBP13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 ASGR1P07306 291 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 ATP4AP20648 1035 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 RARRES1P49788 294 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 PSEN2P49810 448 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 KLK7P49862 253 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 ZBED6P86452 979 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 KIAA0753Q2KHM9 967 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 ZNF484Q5JVG2 852 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 CEP170P1Q96L14 293 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 JPH2Q9BR39 696 aaPredicted RBP13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 CYP26B1Q9NR63 512 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 SEL1LQ9UBV2 794 aa13.88□□□□□ -0.19
NSMCE1-208ENST00000565070 RRN3P2A6NIE6 340 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 HAS3O00219 553 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 SGPL1O95470 568 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 MYBP10242 640 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 GUCY2CP25092 1073 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 RFC5P40937 340 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 ACLYP53396 1101 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 ADAM9Q13443 819 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 WDR59Q6PJI9 974 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 TRIM59Q8IWR1 403 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 KAT2BQ92831 832 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 TIPINQ9BVW5 301 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 SEZ6LQ9BYH1 1024 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 AGPAT5Q9NUQ2 364 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 ODF2LQ9ULJ1 636 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 NRCAMQ92823 1304 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 TMEM150BA6NC51 233 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 CETN3O15182 167 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 FANCGO15287 622 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 EIF3DO15371 548 aaKnown RBP eCLIP13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 DGAT1O75907 488 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 IRX5P78411 483 aaPredicted RBP13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 CDK17Q00537 523 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 CCDC40Q4G0X9 1142 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 PLA2G4FQ68DD2 849 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 PADI6Q6TGC4 694 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 CXCL17Q6UXB2 119 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 TRMT1LQ7Z2T5 733 aaKnown RBP13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 U2AF1L4Q8WU68 220 aaKnown RBP13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 GLT1D1Q96MS3 346 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 CHP1Q99653 195 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 RNPEPQ9H4A4 650 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 PARVGQ9HBI0 331 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 DNAI1Q9UI46 699 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 PHF24Q9UPV7 400 aa13.87□□□□□ -0.19
NSMCE1-208ENST00000565070 CALUO43852 315 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 PRPF6O94906 941 aaKnown RBP13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 FAM13AO94988 1023 aa13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 GNAT1P11488 350 aa13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 HNRNPH3P31942 346 aaKnown RBP13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 GJA8P48165 433 aa13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 TARBP2Q15633 366 aaKnown RBP13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 TSR1Q2NL82 804 aaKnown RBP13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 MTERF2Q49AM1 385 aa13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 C7orf31Q8N865 590 aa13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 ANKLE1Q8NAG6 615 aa13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 MCPH1Q8NEM0 835 aa13.86□□□□□ -0.19
NSMCE1-208ENST00000565070 SLC7A3Q8WY07 619 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms