RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TMEM109Q9BVC6 243 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 SERHL2Q9H4I8 314 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 Q9H521 79 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 NLRC4Q9NPP4 1024 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 GPR108Q9NPR9 543 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 SAR1AQ9NR31 198 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 THAP1Q9NVV9 213 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 STK32BQ9NY57 414 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 ERVK-11Q9UQG0 969 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 PLAAQ9Y263 795 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 ZBTB1Q9Y2K1 713 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 CEP170BQ9Y4F5 1589 aaPredicted RBP6.73□□□□□ -1.33
PTPN9-204ENST00000564970 PNPLA7Q6ZV29 1317 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 USP42Q9H9J4 1324 aaKnown RBP6.73□□□□□ -1.33
PTPN9-204ENST00000564970 CRYBG1Q9Y4K1 1723 aa6.73□□□□□ -1.33
PTPN9-204ENST00000564970 MYO3AQ8NEV4 1616 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 LINC00854A0A1B0GVQ3 168 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 SOWAHDA6NJG2 315 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CSDE1O75534 798 aaKnown RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 KLHL2O95198 593 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 NDUFA10O95299 355 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CHRNB1P11230 501 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CDH3P22223 829 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CDC25CP30307 473 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 PRKAR1BP31321 381 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 ADD1P35611 737 aaKnown RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 NUDT1P36639 197 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 STAT2P52630 851 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 RTP1P59025 263 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 DSG1Q02413 1049 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 KCNC4Q03721 635 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CHRNEQ04844 493 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 RUNX1T1Q06455 604 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 ASPHQ12797 758 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 PDAP1Q13442 181 aaKnown RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CLUL1Q15846 466 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CTC1Q2NKJ3 1217 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 FAM133BQ5BKY9 247 aaKnown RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 TRAPPC3LQ5T215 181 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 NT5DC1Q5TFE4 455 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 OTUD7BQ6GQQ9 843 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 LARP1Q6PKG0 1096 aaKnown RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 LRRC74BQ6ZQY2 392 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 COL23A1Q86Y22 540 aaPredicted RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CCNJLQ8IV13 435 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 HACE1Q8IYU2 909 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 LZTR1Q8N653 840 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 FAM133AQ8N9E0 248 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 GSDMBQ8TAX9 411 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 TBC1D16Q8TBP0 767 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 BRSK1Q8TDC3 778 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 ZC3H15Q8WU90 426 aaKnown RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 PTCD2Q8WV60 388 aaKnown RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 RAPGEF4Q8WZA2 1011 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 STMN2Q93045 179 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 OSBP2Q969R2 916 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 GIMAP5Q96F15 307 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 SAMD11Q96NU1 681 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 BTBD9Q96Q07 612 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 DESI2Q9BSY9 194 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 ISCUQ9H1K1 167 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 CNNM2Q9H8M5 875 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 MOCS1Q9NZB8 636 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 LNPEPQ9UIQ6 1025 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 GNPTGQ9UJJ9 305 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 ZMYND8Q9ULU4 1186 aaPredicted RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 STX8Q9UNK0 236 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 EXOC7Q9UPT5 735 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 COQ6Q9Y2Z9 468 aa6.72□□□□□ -1.33
PTPN9-204ENST00000564970 EPN1Q9Y6I3 576 aaPredicted RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 INO80Q9ULG1 1556 aaPredicted RBP6.72□□□□□ -1.33
PTPN9-204ENST00000564970 A0A1W2PP64 1363 aa6.71□□□□□ -1.33
PTPN9-204ENST00000564970 KNDC1Q76NI1 1749 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 CCDC194A0A1B0GVG4 234 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 FUOMA2VDF0 154 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 ANKRD34BA5PLL1 514 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 SNTNA6NMZ2 147 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 PPP6R2O75170 966 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 ATP2C2O75185 946 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 GMNNO75496 209 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 UFL1O94874 794 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 CRYZL1O95825 349 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 NUDT17P0C025 328 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 CALM1P0DP23 149 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 CALM2P0DP24 149 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 CALM3P0DP25 149 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 PABPC1P11940 636 aaKnown RBP6.71□□□□□ -1.34
PTPN9-204ENST00000564970 ALAS1P13196 640 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 ATP1A3P13637 1013 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 POLR2CP19387 275 aaPredicted RBP6.71□□□□□ -1.34
PTPN9-204ENST00000564970 LMNB1P20700 586 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 FUT4P22083 530 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 TBXAS1P24557 533 aaPredicted RBP6.71□□□□□ -1.34
PTPN9-204ENST00000564970 CRABP2P29373 138 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 WEE1P30291 646 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 HPDP32754 393 aaPredicted RBP6.71□□□□□ -1.34
PTPN9-204ENST00000564970 GTF2H1P32780 548 aa6.71□□□□□ -1.34
PTPN9-204ENST00000564970 LONP1P36776 959 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms