RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 LINC00301Q8NCQ3 95 aa20.6■□□□□ 0.89
PKD1-229ENST00000564890 KIFAP3Q92845 792 aa20.6■□□□□ 0.89
PKD1-229ENST00000564890 EPSTI1Q96J88 318 aa20.6■□□□□ 0.89
PKD1-229ENST00000564890 C17orf80Q9BSJ5 609 aa20.6■□□□□ 0.89
PKD1-229ENST00000564890 CCSER1Q9C0I3 900 aa20.6■□□□□ 0.89
PKD1-229ENST00000564890 A0A0U1RQF3 1178 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 RFXAPO00287 272 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 FGFR1P11362 822 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 PLCG1P19174 1290 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 SLC12A3P55017 1021 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 PPP2R5AQ15172 486 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 PCBP1Q15365 356 aaKnown RBP eCLIP20.59■□□□□ 0.89
PKD1-229ENST00000564890 C1orf186Q6ZWK4 172 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 USP49Q70CQ1 688 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 CMTR2Q8IYT2 770 aaKnown RBP20.59■□□□□ 0.89
PKD1-229ENST00000564890 SYT2Q8N9I0 419 aaPredicted RBP20.59■□□□□ 0.89
PKD1-229ENST00000564890 RNF169Q8NCN4 708 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 SYMPKQ92797 1274 aaKnown RBP20.59■□□□□ 0.89
PKD1-229ENST00000564890 IFT74Q96LB3 600 aa20.59■□□□□ 0.89
PKD1-229ENST00000564890 DAXXQ9UER7 740 aaPredicted RBP20.59■□□□□ 0.89
PKD1-229ENST00000564890 SPTLC2O15270 562 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 TSPAN1O60635 241 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 HIP1RO75146 1068 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 HOXA11P31270 313 aaPredicted RBP20.58■□□□□ 0.89
PKD1-229ENST00000564890 NAMPTP43490 491 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 ADGRE1Q14246 886 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 CDCA2Q69YH5 1023 aaPredicted RBP20.58■□□□□ 0.89
PKD1-229ENST00000564890 ZBTB8OSQ8IWT0 167 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 DEPTORQ8TB45 409 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 LRRC15Q8TF66 581 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 SAMD11Q96NU1 681 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 TRAIPQ9BWF2 469 aa20.58■□□□□ 0.89
PKD1-229ENST00000564890 CDH23Q9H251 3354 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 CHD7Q9P2D1 2997 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 TBKBP1A7MCY6 615 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 YEATS4O95619 227 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 BRD1O95696 1058 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 ATF7P17544 494 aaPredicted RBP20.57■□□□□ 0.88
PKD1-229ENST00000564890 IGFBP4P22692 258 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 GUCY2CP25092 1073 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 AXLP30530 894 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 TXLNAP40222 546 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 NCBP1Q09161 790 aaKnown RBP20.57■□□□□ 0.88
PKD1-229ENST00000564890 AMHR2Q16671 573 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 EPC2Q52LR7 807 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 ZNF598Q86UK7 904 aaKnown RBP20.57■□□□□ 0.88
PKD1-229ENST00000564890 TMEM192Q8IY95 271 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 DAW1Q8N136 415 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 FBXO22Q8NEZ5 403 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 GDPD5Q8WTR4 605 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 CPB2Q96IY4 423 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 DRC1Q96MC2 740 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 TIPINQ9BVW5 301 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 C2orf40Q9H1Z8 148 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 BLOC1S4Q9NUP1 217 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 FAM105AQ9NUU6 356 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 RNF19AQ9NV58 838 aa20.57■□□□□ 0.88
PKD1-229ENST00000564890 MRPL42Q9Y6G3 142 aaKnown RBP20.57■□□□□ 0.88
PKD1-229ENST00000564890 HOXA2O43364 376 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 PPP6R2O75170 966 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 EOMESO95936 686 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 SKIP12755 728 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 RAB27AP51159 221 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 DHX8Q14562 1220 aaKnown RBP20.56■□□□□ 0.88
PKD1-229ENST00000564890 MCM6Q14566 821 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 ATL3Q6DD88 541 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 RAD54LQ92698 747 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 KIFC3Q9BVG8 833 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 KCND2Q9NZV8 630 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 CCDC39Q9UFE4 941 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 ZDHHC9Q9Y397 364 aa20.56■□□□□ 0.88
PKD1-229ENST00000564890 B4GALT5O43286 388 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 LINC00271P0C7V0 271 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 ARF4P18085 180 aaPredicted RBP20.55■□□□□ 0.88
PKD1-229ENST00000564890 CTNNB1P35222 781 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 PEX3P56589 373 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 DNM1Q05193 864 aaKnown RBP20.55■□□□□ 0.88
PKD1-229ENST00000564890 MAPK7Q13164 816 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 UBXN11Q5T124 520 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 NOTUMQ6P988 496 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 GPBP1Q86WP2 473 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 ABI1Q8IZP0 508 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 CLP1Q92989 425 aaKnown RBP20.55■□□□□ 0.88
PKD1-229ENST00000564890 TMEM117Q9H0C3 514 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 PRMT7Q9NVM4 692 aaPredicted RBP20.55■□□□□ 0.88
PKD1-229ENST00000564890 RWDD3Q9Y3V2 267 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 PCDHB2Q9Y5E7 798 aa20.55■□□□□ 0.88
PKD1-229ENST00000564890 FNDC1Q4ZHG4 1894 aaPredicted RBP20.54■□□□□ 0.88
PKD1-229ENST00000564890 NPHP3-ACAD11A0A0J9YXS1 232 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 CCDC169A6NNP5 214 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 ZNF623O75123 536 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 LIG1P18858 919 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 BMPR1AP36894 532 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 DMP1Q13316 513 aaPredicted RBP20.54■□□□□ 0.88
PKD1-229ENST00000564890 MAPK6Q16659 721 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 FAM187BQ17R55 369 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 LONRF3Q496Y0 759 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 ARSHQ5FYA8 562 aa20.54■□□□□ 0.88
PKD1-229ENST00000564890 CLLU1OSQ5K130 101 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms