RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 NCAPG2Q86XI2 1143 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 REXO1Q8N1G1 1221 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 PNMA5Q96PV4 448 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 REEP2Q9BRK0 252 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 BRIP1Q9BX63 1249 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DISC1Q9NRI5 854 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ATP8A2Q9NTI2 1148 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MTRF1LQ9UGC7 380 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 MID2Q9UJV3 735 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SLC8A2Q9UPR5 921 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ZWINTO95229 277 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ATP1A1P05023 1023 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 PPP2R5DQ14738 602 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PDXDC2PQ6P474 469 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SULF1Q8IWU6 871 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PWWP2AQ96N64 755 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CAMKK2Q96RR4 588 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 BLOC1S4Q9NUP1 217 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ZNF446Q9NWS9 450 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MEIS2O14770 477 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 HCRTO43612 131 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ZBTB48P10074 688 aaPredicted RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 CCNA1P78396 465 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SURF1Q15526 300 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 NFRKBQ6P4R8 1299 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 NEK8Q86SG6 692 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SFR1Q86XK3 245 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MYCT1Q8N699 235 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 UBL4BQ8N7F7 174 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DRC3Q9H069 523 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DEFB129Q9H1M3 183 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PDGFCQ9NRA1 345 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 HSPA6P17066 643 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 LIFRP42702 1097 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MAP3K10Q02779 954 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CCDC142Q17RM4 750 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ZBTB41Q5SVQ8 909 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CCDC121Q6ZUS5 278 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SP8Q8IXZ3 490 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CCDC170Q8IYT3 715 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SRPK1Q96SB4 655 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 RNF26Q9BY78 433 aaPredicted RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 RNF181Q9P0P0 153 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 GPR75-ASB3A0A0A6YYF3 556 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DYNC1I1O14576 645 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 LUC7L3O95232 432 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 PHKA2P46019 1235 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PAK1Q13153 545 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PRPF4BQ13523 1007 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 SEPT6Q14141 434 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ASIC2Q16515 512 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 FAM219BQ5XKK7 198 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 REXO1L1PQ8IX06 675 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 NOA1Q8NC60 698 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 CCDC51Q96ER9 411 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 AP1M1Q9BXS5 423 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 FRMD8Q9BZ67 464 aaPredicted RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 MYOZ2Q9NPC6 264 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ZC3H4Q9UPT8 1303 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 A0A1B0GW55 424 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 GIPC1O14908 333 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 MAP3K7O43318 606 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 GAS2O43903 313 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 DUX4L2P0CJ85 424 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DUX4L3P0CJ86 424 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DUX4L4P0CJ87 422 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DUX4L5P0CJ88 424 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DUX4L6P0CJ89 424 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DUX4L7P0CJ90 424 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ATP2B4P23634 1241 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CCNG2Q16589 344 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CRY2Q49AN0 593 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 KCTD16Q68DU8 428 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PALB2Q86YC2 1186 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 UNC45AQ9H3U1 944 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 Q9H521 79 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 TAS2R14Q9NYV8 317 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 TXNDC16Q9P2K2 825 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 DUX4Q9UBX2 424 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ADAMTS1Q9UHI8 967 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 PCDHB8Q9UN66 801 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 SLC16A4O15374 487 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 TACC1O75410 805 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 TOMM70O94826 608 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 IL1R1P14778 569 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ERFP50548 548 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 RUFY4Q6ZNE9 571 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CTU1Q7Z7A3 348 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 POMGNT1Q8WZA1 660 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 KCND2Q9NZV8 630 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 LEMD3Q9Y2U8 911 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CD2APQ9Y5K6 639 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 ATXN2Q99700 1313 aaKnown RBP3.62□□□□□ -1.83
CHD9-213ENST00000564845 CNTNAP1P78357 1384 aa3.62□□□□□ -1.83
CHD9-213ENST00000564845 CCDC169A6NNP5 214 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 H0Y3Z8 333 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 ADCY7P51828 1080 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 CNNM4Q6P4Q7 775 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 OR2W6PQ8NHA6 318 aa3.61□□□□□ -1.83
CHD9-213ENST00000564845 DHX38Q92620 1227 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms