RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-213	ENST00000564757	ARHGAP29	Q52LW3	1261 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	TOR2A	Q5JU69	321 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	TTC38	Q5R3I4	469 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	CATSPERE	Q5SY80	951 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	CXorf57	Q6NSI4	855 aa	Known RBP	4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	PHYKPL	Q8IUZ5	450 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	KBTBD2	Q8IY47	623 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	CPA6	Q8N4T0	437 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	ARRDC4	Q8NCT1	418 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	LMBR1	Q8WVP7	490 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	CLEC4D	Q8WXI8	215 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	ZNF496	Q96IT1	587 aa	Predicted RBP	4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	MEGF9	Q9H1U4	602 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	SEMA4A	Q9H3S1	761 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	POFUT1	Q9H488	388 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	USP36	Q9P275	1121 aa	Known RBP	4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	C11orf21	Q9P2W6	132 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	TESMIN	Q9Y4I5	508 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	TELO2	Q9Y4R8	837 aa		4.64	□□□□□ -1.67
SCAPER-213	ENST00000564757	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	PRAMEF22	A3QJZ6	481 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	NPIPB8	E9PQR5	432 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	PRPF3	O43395	683 aa	Known RBP	4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	ZNF623	O75123	536 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	OSM	P13725	252 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	SDHA	P31040	664 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	IL13	P35225	146 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	GPR3	P46089	330 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	SRSF2	Q01130	221 aa	Known RBP	4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	ODF1	Q14990	250 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	BRD3	Q15059	726 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	IFIT1B	Q5T764	474 aa	Known RBP	4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	SLFN13	Q68D06	897 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	CXorf67	Q86X51	503 aa	Predicted RBP	4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	MIER2	Q8N344	545 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	C16orf92	Q96LL3	132 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	TEKT5	Q96M29	485 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	CSRNP2	Q9H175	543 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	ZBTB21	Q9ULJ3	1066 aa		4.63	□□□□□ -1.67
SCAPER-213	ENST00000564757	TRIM75P	A6NK02	468 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	TPD52L2	O43399	206 aa	Known RBP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	B4GALT4	O60513	344 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	MTHFD2	P13995	350 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	FAH	P16930	419 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	HSPA6	P17066	643 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	ENPP1	P22413	925 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	MLLT6	P55198	1093 aa	Predicted RBP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	HERVK_113	P62684	666 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	NKX3-2	P78367	333 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	SLC6A3	Q01959	620 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	ROM1	Q03395	351 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	SMN1	Q16637	294 aa	Known RBP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	MAP9	Q49MG5	647 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	TMEM240	Q5SV17	173 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	SLFN12L	Q6IEE8	588 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	CMTR2	Q8IYT2	770 aa	Known RBP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757		Q8TCH9	128 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	ASB15	Q8WXK1	588 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	EAF2	Q96CJ1	260 aa	Predicted RBP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	TOE1	Q96GM8	510 aa	Known RBP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	MYL10	Q9BUA6	226 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	NGRN	Q9NPE2	291 aa	Known RBP	4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	PRDM11	Q9NQV5	511 aa		4.62	□□□□□ -1.67
SCAPER-213	ENST00000564757	RASSF10	A6NK89	507 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	ACOT7	O00154	380 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	MAFG	O15525	162 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	PCDHGA12	O60330	932 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	OFD1	O75665	1012 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	PRPF6	O94906	941 aa	Known RBP	4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	LPL	P06858	475 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	SLC5A3	P53794	718 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	MANF	P55145	182 aa	Known RBP	4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	KRT85	P78386	507 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	KIF23	Q02241	960 aa	Predicted RBP	4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	ADCY2	Q08462	1091 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	BIRC2	Q13490	618 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	GTF2H3	Q13889	308 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	FSCN1	Q16658	493 aa	Known RBP	4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	GORAB	Q5T7V8	394 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	PPM1N	Q8N819	430 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	TTLL11	Q8NHH1	800 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	CALML6	Q8TD86	181 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	JADE3	Q92613	823 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	RPGR	Q92834	1020 aa	Known RBP	4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	RAX2	Q96IS3	184 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	CLIC6	Q96NY7	704 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	SLC2A13	Q96QE2	648 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	TCF7L1	Q9HCS4	588 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	NMRK2	Q9NPI5	230 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	UCKL1	Q9NWZ5	548 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	OBP2A	Q9NY56	170 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	SAP30BP	Q9UHR5	308 aa	Known RBP	4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	CROT	Q9UKG9	612 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	ASB1	Q9Y576	335 aa		4.61	□□□□□ -1.67
SCAPER-213	ENST00000564757	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms