RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 DESI2Q9BSY9 194 aa5.29□□□□□ -1.56
CAPN3-212ENST00000564503 ASPNQ9BXN1 380 aa5.29□□□□□ -1.56
CAPN3-212ENST00000564503 NSUN3Q9H649 340 aaKnown RBP5.29□□□□□ -1.56
CAPN3-212ENST00000564503 KCNK12Q9HB15 430 aa5.29□□□□□ -1.56
CAPN3-212ENST00000564503 LZTFL1Q9NQ48 299 aa5.29□□□□□ -1.56
CAPN3-212ENST00000564503 KCNQ5Q9NR82 932 aa5.29□□□□□ -1.56
CAPN3-212ENST00000564503 GEMIN8Q9NWZ8 242 aaKnown RBP5.29□□□□□ -1.56
CAPN3-212ENST00000564503 PCDHA11Q9Y5I1 949 aa5.29□□□□□ -1.56
CAPN3-212ENST00000564503 SYNRGQ9UMZ2 1314 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SLC22A31A6NKX4 558 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 EYA2O00167 538 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SH2B2O14492 632 aaPredicted RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 ZBTB43O43298 467 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 FGAP02671 866 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SNRPA1P09661 255 aaKnown RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 ZGLP1P0C6A0 271 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 RHOXF2BP0C7M4 288 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 ATP2B1P20020 1258 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 GUCY2CP25092 1073 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 GBP1P32455 592 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 EIF4A3P38919 411 aaKnown RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 USP8P40818 1118 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 IARSP41252 1262 aaKnown RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 PIP4K2AP48426 406 aaPredicted RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 HAND2P61296 217 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 VSNL1P62760 191 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 CKAP4Q07065 602 aaKnown RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SSRP1Q08945 709 aaKnown RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 RBL2Q08999 1139 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 MTF1Q14872 753 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SAFBQ15424 915 aaKnown RBP eCLIP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 PTPN21Q16825 1174 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SPATA1Q5VX52 437 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 LMBR1LQ6UX01 489 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 LRP10Q7Z4F1 713 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 FOXP4Q8IVH2 680 aaPredicted RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SLC35F6Q8N357 371 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 IGSF22Q8N9C0 903 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 CCDC148Q8NFR7 591 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 OSBP2Q969R2 916 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 RPGRIP1Q96KN7 1286 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 PPP1R16BQ96T49 567 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 RHOXF2Q9BQY4 288 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 TEX13AQ9BXU3 409 aaPredicted RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 DEF6Q9H4E7 631 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 ZSWIM4Q9H7M6 989 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 FAM204AQ9H8W3 233 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SLC52A2Q9HAB3 445 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 SP110Q9HB58 689 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 GJB4Q9NTQ9 266 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 FBXO2Q9UK22 296 aaPredicted RBP5.28□□□□□ -1.56
CAPN3-212ENST00000564503 MYO6Q9UM54 1294 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 JRKLQ9Y4A0 524 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 MST1RQ04912 1400 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 ABCA3Q99758 1704 aa5.28□□□□□ -1.56
CAPN3-212ENST00000564503 WNK3Q9BYP7 1800 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 LRP5O75197 1615 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 KAT6BQ8WYB5 2073 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 SHISA3A0PJX4 238 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 TARSL2A2RTX5 802 aaKnown RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 GOLGA8AA7E2F4 631 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 RGS13O14921 159 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 FOXN1O15353 648 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 POLR2DO15514 142 aaKnown RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 N4BP1O75113 896 aaKnown RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 PRPF6O94906 941 aaKnown RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 TSPAN15O95858 294 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 KRT1P04264 644 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 USP14P54578 494 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 TIMM10P62072 90 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 AMPD2Q01433 879 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 SPAG1Q07617 926 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 NTRK3Q16288 839 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 RILPL1Q5EBL4 403 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 DNAJC21Q5F1R6 531 aaKnown RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 ARSHQ5FYA8 562 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 SLC9C2Q5TAH2 1124 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 APOA5Q6Q788 366 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 CYP26C1Q6V0L0 522 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 MMS22LQ6ZRQ5 1243 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 APTXQ7Z2E3 356 aaKnown RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 TADA2BQ86TJ2 420 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 RAB11FIP4Q86YS3 637 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 NOSTRINQ8IVI9 506 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 TEX2Q8IWB9 1127 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 TTC5Q8N0Z6 440 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 FBXO15Q8NCQ5 510 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 PDZD8Q8NEN9 1154 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 NAV1Q8NEY1 1877 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 ANKRD20A12PQ8NF67 263 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 GIPC2Q8TF65 315 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 ZNF296Q8WUU4 475 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 RUBCNQ92622 972 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 SMARCC1Q92922 1105 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 AIFM3Q96NN9 605 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 MYCBPQ99417 103 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 LRRC3Q9BY71 257 aa5.27□□□□□ -1.57
CAPN3-212ENST00000564503 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 FOXP1Q9H334 677 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-212ENST00000564503 DCP1AQ9NPI6 582 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms