RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 FAM105AQ9NUU6 356 aa28.15■■■□□ 2.1
AC009041.3-201ENST00000564390 MUC3AQ02505 3323 aa28.15■■■□□ 2.1
AC009041.3-201ENST00000564390 MEIS3P2A8K0S8 358 aa28.14■■■□□ 2.1
AC009041.3-201ENST00000564390 TOB1P50616 345 aaPredicted RBP28.14■■■□□ 2.1
AC009041.3-201ENST00000564390 CAPSQ13938 189 aa28.14■■■□□ 2.1
AC009041.3-201ENST00000564390 TRAIPQ9BWF2 469 aa28.14■■■□□ 2.1
AC009041.3-201ENST00000564390 KIF3AQ9Y496 699 aa28.14■■■□□ 2.1
AC009041.3-201ENST00000564390 PCDHB6Q9Y5E3 794 aa28.14■■■□□ 2.1
AC009041.3-201ENST00000564390 LINC01565O15544 149 aa28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 ASAP2O43150 1006 aa28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 GJB2P29033 226 aa28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 MCTP1Q6DN14 999 aa28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 MAEAQ7L5Y9 396 aa28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 C4orf32Q8N8J7 132 aa28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 ERMNQ8TAM6 284 aa28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 ZNF558Q96NG5 402 aa28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 POLR3FQ9H1D9 316 aaPredicted RBP28.13■■■□□ 2.09
AC009041.3-201ENST00000564390 MXD4Q14582 209 aaPredicted RBP28.12■■■□□ 2.09
AC009041.3-201ENST00000564390 CLUL1Q15846 466 aa28.12■■■□□ 2.09
AC009041.3-201ENST00000564390 PTCRAQ6ISU1 281 aaPredicted RBP28.12■■■□□ 2.09
AC009041.3-201ENST00000564390 KCNT2Q6UVM3 1135 aa28.12■■■□□ 2.09
AC009041.3-201ENST00000564390 POLR3CQ9BUI4 534 aaPredicted RBP28.12■■■□□ 2.09
AC009041.3-201ENST00000564390 GPRC5CQ9NQ84 441 aa28.12■■■□□ 2.09
AC009041.3-201ENST00000564390 INPP5FQ9Y2H2 1132 aa28.12■■■□□ 2.09
AC009041.3-201ENST00000564390 ERLIN2O94905 339 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 IL9P15248 144 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 GLRA2P23416 452 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 HOXA11P31270 313 aaPredicted RBP28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 ARL2P36404 184 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 LTBRP36941 435 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 RAB27AP51159 221 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 DLX2Q07687 328 aaPredicted RBP28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 TFDP1Q14186 410 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 CSPP1Q1MSJ5 1256 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 CTC1Q2NKJ3 1217 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 RBM23Q86U06 439 aaKnown RBP28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 TLR9Q9NR96 1032 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 PCDHB2Q9Y5E7 798 aa28.11■■■□□ 2.09
AC009041.3-201ENST00000564390 INO80B-WBP1J3KQ70 363 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 TBX10O75333 385 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 SKIP12755 728 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 RPA1P27694 616 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 NRIP1P48552 1158 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 PTENP60484 403 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 ERVFC1P60507 584 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 UBE3AQ05086 875 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 PTGDRQ13258 359 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 UBXN11Q5T124 520 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 MICAL1Q8TDZ2 1067 aa28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 MRPL9Q9BYD2 267 aaKnown RBP28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 DBR1Q9UK59 544 aaKnown RBP28.1■■■□□ 2.09
AC009041.3-201ENST00000564390 TSPAN1O60635 241 aa28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 XRCC6P12956 609 aaKnown RBP eCLIP28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 MCM2P49736 904 aa28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 FXR2P51116 673 aaKnown RBP eCLIP28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 MBTD1Q05BQ5 628 aa28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 GLB1LQ6UWU2 654 aa28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 PPP2R3CQ969Q6 453 aa28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 CPB2Q96IY4 423 aa28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 NACC1Q96RE7 527 aa28.09■■■□□ 2.09
AC009041.3-201ENST00000564390 NCK2O43639 380 aa28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 ZNF623O75123 536 aa28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 CCT6AP40227 531 aaKnown RBP28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 ECM1Q16610 540 aa28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 PLPP4Q5VZY2 271 aa28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 HAUS3Q68CZ6 603 aa28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 MRPS27Q92552 414 aaKnown RBP28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 LRWD1Q9UFC0 647 aa28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 SMC3Q9UQE7 1217 aa28.08■■■□□ 2.09
AC009041.3-201ENST00000564390 ARHGEF35A5YM69 484 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 GRXCR2A6NFK2 248 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 NT5C1B-RDH14C9J2C7 533 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 H3BQV1 296 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 ZC3H11AO75152 810 aaKnown RBP eCLIP28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 PPM1AP35813 382 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 PLCB3Q01970 1234 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 NOMO2Q5JPE7 1267 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 AGMOQ6ZNB7 445 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 IFNLR1Q8IU57 520 aaPredicted RBP28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 EIF2AQ9BY44 585 aaKnown RBP28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 TBC1D13Q9NVG8 400 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 SPG21Q9NZD8 308 aa28.07■■■□□ 2.08
AC009041.3-201ENST00000564390 LRRIQ4A6NIV6 560 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 PP2D1A8MPX8 630 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 PER2O15055 1255 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 OFD1O75665 1012 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 NDUFV1P49821 464 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 BCAR1P56945 870 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 AMHR2Q16671 573 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 SLC39A11Q8N1S5 342 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 MCPH1Q8NEM0 835 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 PGBD4Q96DM1 585 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 TCF25Q9BQ70 676 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 GBP3Q9H0R5 595 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 ENTPD7Q9NQZ7 604 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 LZTS1Q9Y250 596 aa28.06■■■□□ 2.08
AC009041.3-201ENST00000564390 FSCN2O14926 492 aa28.05■■■□□ 2.08
AC009041.3-201ENST00000564390 B4GALT5O43286 388 aa28.05■■■□□ 2.08
AC009041.3-201ENST00000564390 RBM10P98175 930 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms