RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 SRGAP2BP0DMP2 458 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 HOXB8P17481 243 aaPredicted RBP18.71■□□□□ 0.59
CCNF-203ENST00000564236 PBX3P40426 434 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 BCAR1P56945 870 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 RBM10P98175 930 aaKnown RBP18.71■□□□□ 0.59
CCNF-203ENST00000564236 NR5A1Q13285 461 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 PCBP1Q15365 356 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCNF-203ENST00000564236 PLPP4Q5VZY2 271 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 TWF2Q6IBS0 349 aaKnown RBP18.71■□□□□ 0.59
CCNF-203ENST00000564236 OTUD6AQ7L8S5 288 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 MRPL43Q8N983 215 aaKnown RBP18.71■□□□□ 0.59
CCNF-203ENST00000564236 RNF169Q8NCN4 708 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 NLRP4Q96MN2 994 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 HSD17B14Q9BPX1 270 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 BRMS1Q9HCU9 246 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 ENTPD7Q9NQZ7 604 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 IRAK3Q9Y616 596 aa18.71■□□□□ 0.59
CCNF-203ENST00000564236 FAM205CA6NFA0 338 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 SLITRK3O94933 977 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 BAG4O95429 457 aaKnown RBP18.7■□□□□ 0.58
CCNF-203ENST00000564236 ALDH7A1P49419 539 aaKnown RBP18.7■□□□□ 0.58
CCNF-203ENST00000564236 POLGP54098 1239 aaPredicted RBP18.7■□□□□ 0.58
CCNF-203ENST00000564236 POU5F1BQ06416 359 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 ANKRD54Q6NXT1 300 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 GLB1LQ6UWU2 654 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 CATSPER4Q7RTX7 472 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 MRPL10Q7Z7H8 261 aaKnown RBP18.7■□□□□ 0.58
CCNF-203ENST00000564236 TCP11Q8WWU5 503 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 PRPF31Q8WWY3 499 aaKnown RBP18.7■□□□□ 0.58
CCNF-203ENST00000564236 KCNH6Q9H252 994 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 RGL1Q9NZL6 768 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 MUTYHQ9UIF7 546 aa18.7■□□□□ 0.58
CCNF-203ENST00000564236 C2orf71A6NGG8 1288 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 OFD1O75665 1012 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 HOXA11P31270 313 aaPredicted RBP18.69■□□□□ 0.58
CCNF-203ENST00000564236 LAMTOR4Q0VGL1 99 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 SMC1AQ14683 1233 aaKnown RBP18.69■□□□□ 0.58
CCNF-203ENST00000564236 EMC2Q15006 297 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 NOMO2Q5JPE7 1267 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 SYCE2Q6PIF2 218 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 TMC7Q7Z402 723 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 FERMT3Q86UX7 667 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 IFNLR1Q8IU57 520 aaPredicted RBP18.69■□□□□ 0.58
CCNF-203ENST00000564236 NECAB1Q8N987 351 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 EDAQ92838 391 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 PGBD4Q96DM1 585 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 DYDC2Q96IM9 177 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 ZBP1Q9H171 429 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 MINDY3Q9H8M7 445 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 TBC1D13Q9NVG8 400 aa18.69■□□□□ 0.58
CCNF-203ENST00000564236 MEIS3P2A8K0S8 358 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 HOXD11P31277 338 aaPredicted RBP18.68■□□□□ 0.58
CCNF-203ENST00000564236 NCAPH2Q6IBW4 605 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 AGMOQ6ZNB7 445 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 BMP8AQ7Z5Y6 402 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 DDX53Q86TM3 631 aaKnown RBP18.68■□□□□ 0.58
CCNF-203ENST00000564236 CASP10Q92851 521 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 TMEM143Q96AN5 459 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 TMEM169Q96HH4 297 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 MTMR9Q96QG7 549 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 NRDE2Q9H7Z3 1164 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 XPNPEP1Q9NQW7 623 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 STK39Q9UEW8 545 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 PCDHA12Q9UN75 941 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 PCDHB2Q9Y5E7 798 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 CNTNAP2Q9UHC6 1331 aa18.68■□□□□ 0.58
CCNF-203ENST00000564236 BTBD18B2RXH4 712 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 INPPL1O15357 1258 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 MARCH6O60337 910 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 DTNBO60941 627 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 GALTP07902 379 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 ST3GAL1Q11201 340 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 GIT2Q14161 759 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 CTTNQ14247 550 aaKnown RBP18.67■□□□□ 0.58
CCNF-203ENST00000564236 MXD4Q14582 209 aaPredicted RBP18.67■□□□□ 0.58
CCNF-203ENST00000564236 UBXN11Q5T124 520 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 TMEM173Q86WV6 379 aaPredicted RBP18.67■□□□□ 0.58
CCNF-203ENST00000564236 DIS3L2Q8IYB7 885 aaKnown RBP18.67■□□□□ 0.58
CCNF-203ENST00000564236 LPPQ93052 612 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 IGSF21Q96ID5 467 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 EIF2AK1Q9BQI3 630 aaKnown RBP18.67■□□□□ 0.58
CCNF-203ENST00000564236 NFKBIZQ9BYH8 718 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 ANKEF1Q9NU02 776 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 HCFC2Q9Y5Z7 792 aa18.67■□□□□ 0.58
CCNF-203ENST00000564236 ZBTB39O15060 712 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 CTSAP10619 480 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCNF-203ENST00000564236 AXLP30530 894 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 TECP42680 631 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 NEK4P51957 841 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 PTENP60484 403 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 CYP4A11Q02928 519 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 BMS1Q14692 1282 aaKnown RBP18.66■□□□□ 0.58
CCNF-203ENST00000564236 CALCRLQ16602 461 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 RNF149Q8NC42 400 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 CNNM3Q8NE01 707 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 CCDC51Q96ER9 411 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 MTRQ99707 1265 aa18.66■□□□□ 0.58
CCNF-203ENST00000564236 TTC12Q9H892 705 aaPredicted RBP18.66■□□□□ 0.58
CCNF-203ENST00000564236 NT5C1B-RDH14C9J2C7 533 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms