RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 BRAFP15056 766 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 GNAQP50148 359 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 C6orf118Q5T5N4 469 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 GALNT17Q6IS24 598 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 CYP4F22Q6NT55 531 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 ZNF571Q7Z3V5 609 aaPredicted RBP13.7□□□□□ -0.22
CCDC187-201ENST00000563590 C18orf8Q96DM3 657 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 ERP27Q96DN0 273 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 GBP5Q96PP8 586 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 FGFBP2Q9BYJ0 223 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 PITPNM3Q9BZ71 974 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 VCXQ9H320 206 aa13.7□□□□□ -0.22
CCDC187-201ENST00000563590 CCDC160A6NGH7 325 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 SPOPO43791 374 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 CREB1P16220 341 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 RFC5P40937 340 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 GPBP1Q86WP2 473 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC187-201ENST00000563590 SYN2Q92777 582 aaPredicted RBP13.69□□□□□ -0.22
CCDC187-201ENST00000563590 RAB3IPQ96QF0 476 aaPredicted RBP13.69□□□□□ -0.22
CCDC187-201ENST00000563590 HDAC9Q9UKV0 1011 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 SPDYE5A6NIY4 337 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 SPAG7O75391 227 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
CCDC187-201ENST00000563590 TNFAIP3P21580 790 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 GRAPQ13588 217 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 LAMB3Q13751 1172 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 SYCE1Q8N0S2 351 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 GRAPLQ8TC17 118 aaPredicted RBP13.69□□□□□ -0.22
CCDC187-201ENST00000563590 PCDHAC2Q9Y5I4 1007 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 E9PMD0 336 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 PAEPP09466 180 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 GNA11P29992 359 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 GRIK3Q13003 919 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 RCN2Q14257 317 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 SLC27A3Q5K4L6 730 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
CCDC187-201ENST00000563590 DGKHQ86XP1 1220 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 COL23A1Q86Y22 540 aaPredicted RBP13.69□□□□□ -0.22
CCDC187-201ENST00000563590 CCDC65Q8IXS2 484 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 SPIRE2Q8WWL2 714 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 RPS6KC1Q96S38 1066 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 PIDD1Q9HB75 910 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 CTNNAL1Q9UBT7 734 aa13.69□□□□□ -0.22
CCDC187-201ENST00000563590 SLMAPQ14BN4 828 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 WDR66Q8TBY9 1149 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 ZNF287Q9HBT7 754 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 ATP8A2Q9NTI2 1148 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 THAP12O43422 761 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 PECAM1P16284 738 aaPredicted RBP13.68□□□□□ -0.22
CCDC187-201ENST00000563590 STAT1P42224 750 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 GPSM2P81274 684 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 PHLDB2Q86SQ0 1253 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 SCYL3Q8IZE3 742 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 TPCN2Q8NHX9 752 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 ACTRT1Q8TDG2 376 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 RAD54LQ92698 747 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 PABPC3Q9H361 631 aaKnown RBP13.68□□□□□ -0.22
CCDC187-201ENST00000563590 RIC8AQ9NPQ8 531 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 STK17AQ9UEE5 414 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 NAGPAQ9UK23 515 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 C2CD2Q9Y426 696 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
CCDC187-201ENST00000563590 SLC37A4O43826 429 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 SMNDC1O75940 238 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC187-201ENST00000563590 AKR1B1P15121 316 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 GALCP54803 685 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 COASYQ13057 564 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 LRRC23Q53EV4 343 aaPredicted RBP13.68□□□□□ -0.22
CCDC187-201ENST00000563590 KIAA1755Q5JYT7 1200 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 UBAP2Q5T6F2 1119 aaKnown RBP13.68□□□□□ -0.22
CCDC187-201ENST00000563590 RNF220Q5VTB9 566 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 ZNF746Q6NUN9 644 aaPredicted RBP13.68□□□□□ -0.22
CCDC187-201ENST00000563590 JAMLQ86YT9 394 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 EIF1ADQ8N9N8 165 aaKnown RBP13.68□□□□□ -0.22
CCDC187-201ENST00000563590 MAGEC3Q8TD91 643 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 STMN2Q93045 179 aa13.68□□□□□ -0.22
CCDC187-201ENST00000563590 USP17L10C9JJH3 530 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 POC1B-GALNT4F8VUJ3 575 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 H0YIN7 160 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 SNX3O60493 162 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 KRT15P19012 456 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 CNGA1P29973 690 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 PRKG1Q13976 671 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ITIH4Q14624 930 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 TMED2Q15363 201 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ZRSR2Q15696 482 aaKnown RBP13.67□□□□□ -0.22
CCDC187-201ENST00000563590 SEL1L2Q5TEA6 688 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ERP44Q9BS26 406 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 SLITRK6Q9H5Y7 841 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 GCNT4Q9P109 453 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ARL2BPQ9Y2Y0 163 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 GH1P01241 217 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 RARAP10276 462 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 KLC1Q07866 573 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 MIGA2Q7L4E1 593 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 MAB21L3Q8N8X9 362 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 LRRC57Q8N9N7 239 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms