RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CD52P31358 61 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ARL2P36404 184 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 USP46P62068 366 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 DEFB103AP81534 67 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 GRB10Q13322 594 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 TMEM119Q4V9L6 283 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ATL3Q6DD88 541 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 RTN4RL1Q86UN2 441 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 FAM228AQ86W67 206 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 KSR1Q8IVT5 923 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 CRIPAKQ8N1N5 446 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 TCP11Q8WWU5 503 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 PRPF31Q8WWY3 499 aaKnown RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 LINC01599Q8WXQ3 324 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 TMEM143Q96AN5 459 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF396Q96N95 335 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 CCSER1Q9C0I3 900 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 NT5C3AQ9H0P0 336 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 BHMT2Q9H2M3 363 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 TMX1Q9H3N1 280 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ATP6V0A4Q9HBG4 840 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ERVK-5Q9HDB9 667 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 GINS2Q9Y248 185 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 COL4A3BPQ9Y5P4 624 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 A0A087WZ62 844 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ZBBXA8MT70 800 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 E9PMD0 336 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ENPP3O14638 875 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ASAP2O43150 1006 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 RPS6KA5O75582 802 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 EYA4O95677 639 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ATP2A2P16615 1042 aaKnown RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 CYP11B2P19099 503 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 CEBPZQ03701 1054 aaKnown RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 POU5F1BQ06416 359 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 FOXD4L5Q5VV16 416 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.88□□□□□ -1.314e-7■■■■■ 29.1
CNOT1-204ENST00000563130 USP49Q70CQ1 688 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 CABP7Q86V35 215 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 RHPN2Q8IUC4 686 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 MCPH1Q8NEM0 835 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 LRRC15Q8TF66 581 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 PSPC1Q8WXF1 523 aaKnown RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 FOXD4L4Q8WXT5 416 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 TOP1MTQ969P6 601 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 PPP1R16BQ96T49 567 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 FDXACB1Q9BRP7 624 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 FTHL17Q9BXU8 183 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 PBX4Q9BYU1 374 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 CSRNP2Q9H175 543 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 TFIP11Q9UBB9 837 aaKnown RBP6.88□□□□□ -1.31
CNOT1-204ENST00000563130 ST3GAL5Q9UNP4 418 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 DNM3Q9UQ16 869 aa6.88□□□□□ -1.31
CNOT1-204ENST00000563130 CDH23Q9H251 3354 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 GPR182O15218 404 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 USO1O60763 962 aaKnown RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 NR1I2O75469 434 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 GJB5O95377 273 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 GLRA2P23416 452 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 UBA7P41226 1012 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 LAMTOR4Q0VGL1 99 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 PAK2Q13177 524 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 DSC3Q14574 896 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 MXD4Q14582 209 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 ODR4Q5SWX8 454 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 BLOC1S3Q6QNY0 202 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 HERC6Q8IVU3 1022 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 EPSTI1Q96J88 318 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 ZNF668Q96K58 619 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 CLIC6Q96NY7 704 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 NFKBIZQ9BYH8 718 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 BLOC1S4Q9NUP1 217 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 PTPRSQ13332 1948 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 MYH15Q9Y2K3 1946 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 MICAL3Q7RTP6 2002 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 ARHGEF35A5YM69 484 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 SPTLC2O15270 562 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 MGEA5O60502 916 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 KCNJ6P48051 423 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 SLC12A3P55017 1021 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 PTENP60484 403 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 COPS2P61201 443 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 HTRA4P83105 476 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 DNM1Q05193 864 aaKnown RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 NFX1Q12986 1120 aaKnown RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 CAPSQ13938 189 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 STK38Q15208 465 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 SPECC1Q5M775 1068 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 AXDND1Q5T1B0 1012 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 RINT1Q6NUQ1 792 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 C1orf186Q6ZWK4 172 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 SRGAP1Q7Z6B7 1085 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 SYT2Q8N9I0 419 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 ASAP3Q8TDY4 903 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 NLRP4Q96MN2 994 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 CCDC43Q96MW1 224 aaKnown RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 GCOM2Q9BZD3 368 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 INO80BQ9C086 356 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-204ENST00000563130 MINDY3Q9H8M7 445 aa6.87□□□□□ -1.31
CNOT1-204ENST00000563130 RC3H2Q9HBD1 1191 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms