RNA–Protein interactions for RNA: ENST00000563127.1

KATNB1-204, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-204ENST00000563127 RNF19AQ9NV58 838 aa21.56■■□□□ 1.04
KATNB1-204ENST00000563127 COL4A4P53420 1690 aaPredicted RBP21.56■■□□□ 1.04
KATNB1-204ENST00000563127 PRUNE2Q8WUY3 3088 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 C5orf67F2Z3F1 127 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 SKIP12755 728 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 CEBPZQ03701 1054 aaKnown RBP21.55■■□□□ 1.04
KATNB1-204ENST00000563127 NCBP1Q09161 790 aaKnown RBP21.55■■□□□ 1.04
KATNB1-204ENST00000563127 LONRF3Q496Y0 759 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 SPOUT1Q5T280 376 aaKnown RBP21.55■■□□□ 1.04
KATNB1-204ENST00000563127 ABI1Q8IZP0 508 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 CDK5RAP3Q96JB5 506 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 AK8Q96MA6 479 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 CASD1Q96PB1 797 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 PNMA5Q96PV4 448 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 FAM105AQ9NUU6 356 aa21.55■■□□□ 1.04
KATNB1-204ENST00000563127 TYW1Q9NV66 732 aaKnown RBP21.55■■□□□ 1.04
KATNB1-204ENST00000563127 ZNF623O75123 536 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 ATF7P17544 494 aaPredicted RBP21.54■■□□□ 1.04
KATNB1-204ENST00000563127 UBA7P41226 1012 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 GRIN1Q05586 938 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 MBTD1Q05BQ5 628 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 PCBP1Q15365 356 aaKnown RBP eCLIP21.54■■□□□ 1.04
KATNB1-204ENST00000563127 HYIQ5T013 277 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 CABP7Q86V35 215 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 BSNDQ8WZ55 320 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 C11orf84Q9BUA3 381 aaPredicted RBP21.54■■□□□ 1.04
KATNB1-204ENST00000563127 PLVAPQ9BX97 442 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 NFKBIZQ9BYH8 718 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 NT5C3AQ9H0P0 336 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 PRDM6Q9NQX0 595 aa21.54■■□□□ 1.04
KATNB1-204ENST00000563127 KIAA1671Q9BY89 1806 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 TSPAN1O60635 241 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 MARCKSP29966 332 aaPredicted RBP21.53■■□□□ 1.04
KATNB1-204ENST00000563127 LONP1P36776 959 aaKnown RBP21.53■■□□□ 1.04
KATNB1-204ENST00000563127 RAB27AP51159 221 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 PTPAQ15257 358 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 CLLU1OSQ5K130 101 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.53■■□□□ 1.04
KATNB1-204ENST00000563127 HELQQ8TDG4 1101 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 LPPQ93052 612 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 MRPL38Q96DV4 380 aaKnown RBP21.53■■□□□ 1.04
KATNB1-204ENST00000563127 CPB2Q96IY4 423 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 HCSTQ9UBK5 93 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 PCDHB2Q9Y5E7 798 aa21.53■■□□□ 1.04
KATNB1-204ENST00000563127 GRM6O15303 877 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 SSBP05455 408 aaKnown RBP eCLIP21.52■■□□□ 1.04
KATNB1-204ENST00000563127 AXLP30530 894 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 SKIV2LQ15477 1246 aaKnown RBP21.52■■□□□ 1.04
KATNB1-204ENST00000563127 AMHR2Q16671 573 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 PTPROQ16827 1216 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 UBXN11Q5T124 520 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 FOXD4L5Q5VV16 416 aaPredicted RBP21.52■■□□□ 1.04
KATNB1-204ENST00000563127 RINT1Q6NUQ1 792 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 LRRC55Q6ZSA7 311 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 KCTD17Q8N5Z5 321 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 FOXD4L4Q8WXT5 416 aaPredicted RBP21.52■■□□□ 1.04
KATNB1-204ENST00000563127 KIFAP3Q92845 792 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 IFT74Q96LB3 600 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 ALG13Q9NP73 1137 aaKnown RBP21.52■■□□□ 1.04
KATNB1-204ENST00000563127 AAASQ9NRG9 546 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 PLAGL2Q9UPG8 496 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 PCDHB12Q9Y5F1 795 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 BRWD1Q9NSI6 2320 aa21.52■■□□□ 1.04
KATNB1-204ENST00000563127 EYSQ5T1H1 3165 aa21.52■■□□□ 1.03
KATNB1-204ENST00000563127 ARF4P18085 180 aaPredicted RBP21.51■■□□□ 1.03
KATNB1-204ENST00000563127 NAMPTP43490 491 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 PPP2R5AQ15172 486 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 NAALADL2Q58DX5 795 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 C1orf186Q6ZWK4 172 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 ZBTB8OSQ8IWT0 167 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 KLHL23Q8NBE8 558 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 DEPTORQ8TB45 409 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 P2RX5Q93086 422 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 PGBD4Q96DM1 585 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 CALML4Q96GE6 196 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 USP28Q96RU2 1077 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 RUSC1Q9BVN2 902 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 CWH43Q9H720 699 aa21.51■■□□□ 1.03
KATNB1-204ENST00000563127 MEIS3P2A8K0S8 358 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 B4GALT5O43286 388 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 SLC26A4O43511 780 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 ITGB1P05556 798 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 PDIA4P13667 645 aaKnown RBP21.5■■□□□ 1.03
KATNB1-204ENST00000563127 TMEM119Q4V9L6 283 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 CDCA2Q69YH5 1023 aaPredicted RBP21.5■■□□□ 1.03
KATNB1-204ENST00000563127 NOTUMQ6P988 496 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 MRPL10Q7Z7H8 261 aaKnown RBP21.5■■□□□ 1.03
KATNB1-204ENST00000563127 SYT2Q8N9I0 419 aaPredicted RBP21.5■■□□□ 1.03
KATNB1-204ENST00000563127 CSRNP2Q9H175 543 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 C2orf40Q9H1Z8 148 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 MYH11P35749 1972 aa21.5■■□□□ 1.03
KATNB1-204ENST00000563127 HIP1RO75146 1068 aa21.49■■□□□ 1.03
KATNB1-204ENST00000563127 PLA2G4BP0C869 781 aa21.49■■□□□ 1.03
KATNB1-204ENST00000563127 SLC39A14Q15043 492 aa21.49■■□□□ 1.03
KATNB1-204ENST00000563127 SPECC1Q5M775 1068 aa21.49■■□□□ 1.03
KATNB1-204ENST00000563127 GLB1LQ6UWU2 654 aa21.49■■□□□ 1.03
KATNB1-204ENST00000563127 LRRC43Q8N309 656 aa21.49■■□□□ 1.03
KATNB1-204ENST00000563127 COLGALT1Q8NBJ5 622 aa21.49■■□□□ 1.03
KATNB1-204ENST00000563127 SPPL3Q8TCT6 385 aa21.49■■□□□ 1.03
KATNB1-204ENST00000563127 CCDC51Q96ER9 411 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms