RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SETDB1Q15047 1291 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 PGM5Q15124 567 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 RHPN2Q8IUC4 686 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 WHAMMQ8TF30 809 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 GRK7Q8WTQ7 553 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 PPP1R13BQ96KQ4 1090 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 CARD6Q9BX69 1037 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 RAB20Q9NX57 234 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 DNAJC12Q9UKB3 198 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 UTP11Q9Y3A2 253 aaKnown RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 GPC3P51654 580 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 RINT1Q6NUQ1 792 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 MAP7D3Q8IWC1 876 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 MSL3Q8N5Y2 521 aaKnown RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 FBXL13Q8NEE6 735 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 NHEJ1Q9H9Q4 299 aaPredicted RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 ST7Q9NRC1 585 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 OLFML3Q9NRN5 406 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.13□□□□□ -1.11
TCF4-216ENST00000562680 ITGB4P16144 1822 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 SPDYE5A6NIY4 337 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 EIF3CLB5ME19 914 aaKnown RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 ABCB4P21439 1286 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 DUOXA2Q1HG44 320 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 LRRC23Q53EV4 343 aaPredicted RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 NOL9Q5SY16 702 aaKnown RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 MAP1SQ66K74 1059 aaPredicted RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 THNSL1Q8IYQ7 743 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 GABPB2Q8TAK5 448 aaPredicted RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 HAUS1Q96CS2 278 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 ZNF560Q96MR9 790 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 EIF3CQ99613 913 aaKnown RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 ABHD10Q9NUJ1 306 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 NRBP1Q9UHY1 535 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 CDC23Q9UJX2 597 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 ZSCAN26Q16670 478 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 TMEM119Q4V9L6 283 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 ALKBH5Q6P6C2 394 aaKnown RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 FAM133AQ8N9E0 248 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 RNF149Q8NC42 400 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 TRPM4Q8TD43 1214 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 RNF34Q969K3 372 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 SENP7Q9BQF6 1050 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 MED10Q9BTT4 135 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 RMI1Q9H9A7 625 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 RBAKQ9NYW8 714 aaPredicted RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 CAPN11Q9UMQ6 739 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 IL18RAPO95256 599 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 SND1Q7KZF4 910 aaKnown RBP eCLIP8.12□□□□□ -1.11
TCF4-216ENST00000562680 RNF10Q8N5U6 811 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 ANKRD13CQ8N6S4 541 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 ZNF653Q96CK0 615 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 C12orf42Q96LP6 360 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 FAM213AQ9BRX8 229 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 SCAF8Q9UPN6 1271 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 GOLGA8IPA6NC78 632 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 GOLGA8JA6NMD2 632 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 PDHXO00330 501 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 RARBP10826 455 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 NMT1P30419 496 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 GRIN1Q05586 938 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 CHADLQ6NUI6 762 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 REM2Q8IYK8 340 aaPredicted RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 TMEM35BQ8NCS4 154 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 CCDC114Q96M63 670 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 APOL6Q9BWW8 343 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 CYP26B1Q9NR63 512 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 MRFAP1Q9Y605 127 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 BTAF1O14981 1849 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 ABCA3Q99758 1704 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 EFCAB8A8MWE9 144 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 ARP10275 920 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 SPOUT1Q5T280 376 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 NT5DC1Q5TFE4 455 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 HDXQ7Z353 690 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 PBKQ96KB5 322 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 TSNARE1Q96NA8 513 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 MTMR9Q96QG7 549 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 P2RX7Q99572 595 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 INTS2Q9H0H0 1204 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 HSPBP1Q9NZL4 362 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 PRKAG2Q9UGJ0 569 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 DIS3Q9Y2L1 958 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 SSU72P8A0A1W2PR75 194 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 ANO9A1A5B4 782 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 COBLO75128 1261 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 MED24O75448 989 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 NAMPTP43490 491 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 LMNB2Q03252 620 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 BBOF1Q8ND07 529 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 ABHD16BQ9H3Z7 469 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 FAM204AQ9H8W3 233 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 PYCARDQ9ULZ3 195 aa8.12□□□□□ -1.11
TCF4-216ENST00000562680 RIOK3O14730 519 aaKnown RBP8.12□□□□□ -1.11
TCF4-216ENST00000562680 DAPK3O43293 454 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms