RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 NCALDP61601 193 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 POLR2GP62487 172 aaKnown RBP eCLIP5.3□□□□□ -1.56
TCF4-215ENST00000562638 RAC1P63000 192 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 EXOSC9Q06265 439 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 C19orf57Q0VDD7 668 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 SQLEQ14534 574 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 R3HDM1Q15032 1099 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 STK11Q15831 433 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 EZH2Q15910 746 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 PKN2Q16513 984 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 PHKG1Q16816 387 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 SKIDA1Q1XH10 827 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 GALNTL6Q49A17 601 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 SGO2Q562F6 1265 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 IGSF11Q5DX21 431 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 CFAP70Q5T0N1 1121 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 LDLRAD1Q5T700 205 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 MEX3CQ5U5Q3 659 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 TRIM68Q6AZZ1 485 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 FAM122CQ6P4D5 195 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 USP50Q70EL3 339 aaPredicted RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 ASRGL1Q7L266 308 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 ATG9AQ7Z3C6 839 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 TMC7Q7Z402 723 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 CTAGE6Q86UF2 777 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 SPATA24Q86W54 205 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 CLVS1Q8IUQ0 354 aaPredicted RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 CCNJLQ8IV13 435 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 CTAGE4Q8IX94 777 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 PAF1Q8N7H5 531 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 CCDC148Q8NFR7 591 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 OR10Z1Q8NGY1 313 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 SPATA18Q8TC71 538 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 STK32AQ8WU08 396 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 DNAJC9Q8WXX5 260 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 CAVIN3Q969G5 261 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 ABTB1Q969K4 478 aaPredicted RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 EME1Q96AY2 570 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 SYTL4Q96C24 671 aaPredicted RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 RMDN1Q96DB5 314 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 RRP36Q96EU6 259 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 PGBD1Q96JS3 809 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 IFT74Q96LB3 600 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 PANX2Q96RD6 677 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 NELL2Q99435 816 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 CENPKQ9BS16 269 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 MXD3Q9BW11 206 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 MRPL9Q9BYD2 267 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 FOXP3Q9BZS1 431 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 MTMR12Q9C0I1 747 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 ESF1Q9H501 851 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 ZSWIM4Q9H7M6 989 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 BRD9Q9H8M2 597 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 SLC38A10Q9HBR0 1119 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 UBN1Q9NPG3 1134 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 PLCB1Q9NQ66 1216 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 WASH6PQ9NQA3 447 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 C8orf4Q9NR00 106 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 FARSBQ9NSD9 589 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 GID8Q9NWU2 228 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 STK17AQ9UEE5 414 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 KCNN3Q9UGI6 736 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 TCEAL9Q9UHQ7 104 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 SLC12A6Q9UHW9 1150 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 GRID1Q9ULK0 1009 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 PA2G4Q9UQ80 394 aaKnown RBP5.3□□□□□ -1.56
TCF4-215ENST00000562638 ATP11BQ9Y2G3 1177 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 TRIM17Q9Y577 477 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 PTPRTO14522 1441 aa5.3□□□□□ -1.56
TCF4-215ENST00000562638 CPDO75976 1380 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 FAM237AA0A1B0GTK4 181 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 VPS37CA5D8V6 355 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 SNTNA6NMZ2 147 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 B8ZZF3 427 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ELL2O00472 640 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 PFDN6O15212 129 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 MAGEB3O15480 346 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ONECUT3O60422 494 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 STX10O60499 249 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ICMTO60725 284 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ATP9AO75110 1047 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CNOT3O75175 753 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 PEX11AO75192 247 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 GUCY1B2O75343 617 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 RSL1D1O76021 490 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 RHOBTB3O94955 611 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 ECDO95905 644 aaPredicted RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 GNRH1P01148 92 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 CHGBP05060 677 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 IFIT2P09913 472 aaKnown RBP5.29□□□□□ -1.56
TCF4-215ENST00000562638 TPBGLP0DKB5 382 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 SRGNP10124 158 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 RARBP10826 455 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 NCAM1P13591 858 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 RAC2P15153 192 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 PRKACAP17612 351 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 AXLP30530 894 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 GTF2H1P32780 548 aa5.29□□□□□ -1.56
TCF4-215ENST00000562638 IFNA8P32881 189 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms