RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 ZNF598Q86UK7 904 aaKnown RBP17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 IFNLR1Q8IU57 520 aaPredicted RBP17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 RNF169Q8NCN4 708 aa17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 ASB2Q96Q27 587 aa17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 USP28Q96RU2 1077 aa17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 ELAC1Q9H777 363 aaKnown RBP17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 CHST12Q9NRB3 414 aa17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 MTCH2Q9Y6C9 303 aa17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 MYO7AQ13402 2215 aa17.06■□□□□ 0.32
CCNDBP1-203ENST00000562553 A0A0U1RQF3 1178 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 LRRIQ4A6NIV6 560 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 INO80B-WBP1J3KQ70 363 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 MARCKSP29966 332 aaPredicted RBP17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 HOXA11P31270 313 aaPredicted RBP17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 CTNNB1P35222 781 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 MRPS5P82675 430 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 POU5F1BQ06416 359 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 PKP1Q13835 747 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 CCDC85BQ15834 202 aaPredicted RBP17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 AMHR2Q16671 573 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 TMEM119Q4V9L6 283 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 TWF2Q6IBS0 349 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 CABP7Q86V35 215 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 MICALL1Q8N3F8 863 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 LRRC15Q8TF66 581 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 CLP1Q92989 425 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 AK8Q96MA6 479 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 SAMD11Q96NU1 681 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 RUSC1Q9BVN2 902 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 ZSCAN16Q9H4T2 348 aaPredicted RBP17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 DACT1Q9NYF0 836 aa17.05■□□□□ 0.32
CCNDBP1-203ENST00000562553 PLXNA4Q9HCM2 1894 aa17.04■□□□□ 0.32
CCNDBP1-203ENST00000562553 TSPAN1O60635 241 aa17.04■□□□□ 0.32
CCNDBP1-203ENST00000562553 LONP1P36776 959 aaKnown RBP17.04■□□□□ 0.32
CCNDBP1-203ENST00000562553 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
CCNDBP1-203ENST00000562553 CPB2Q96IY4 423 aa17.04■□□□□ 0.32
CCNDBP1-203ENST00000562553 NFKBIZQ9BYH8 718 aa17.04■□□□□ 0.32
CCNDBP1-203ENST00000562553 FAM105AQ9NUU6 356 aa17.04■□□□□ 0.32
CCNDBP1-203ENST00000562553 FBXO2Q9UK22 296 aaPredicted RBP17.04■□□□□ 0.32
CCNDBP1-203ENST00000562553 XIRP2A4UGR9 3374 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 MEIS3P2A8K0S8 358 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 B4GALT5O43286 388 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 GTPBP6O43824 516 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 ERLIN2O94905 339 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 BMPR1AP36894 532 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 GPM6BQ13491 265 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 LONRF3Q496Y0 759 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 CDCA2Q69YH5 1023 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 RINT1Q6NUQ1 792 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 C1orf186Q6ZWK4 172 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 USP49Q70CQ1 688 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 DAW1Q8N136 415 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 LPPQ93052 612 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 CDK5RAP3Q96JB5 506 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 KIFC3Q9BVG8 833 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 TRAIPQ9BWF2 469 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 TMEM117Q9H0C3 514 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 NT5C3AQ9H0P0 336 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 CSRNP2Q9H175 543 aa17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-203ENST00000562553 C5orf67F2Z3F1 127 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 H3BNC9 293 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 TNFRSF10AO00220 468 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 EOMESO95936 686 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 SSBP05455 408 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 ZSCAN22P10073 491 aaPredicted RBP17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 ARF4P18085 180 aaPredicted RBP17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 UBA7P41226 1012 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 MAPK7Q13164 816 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 KARSQ15046 597 aaKnown RBP17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 HELQQ8TDG4 1101 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 CLIC6Q96NY7 704 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 TYW1Q9NV66 732 aaKnown RBP17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 RWDD3Q9Y3V2 267 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 NCOR1O75376 2440 aa17.02■□□□□ 0.32
CCNDBP1-203ENST00000562553 HOXA2O43364 376 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 HIP1RO75146 1068 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 F13A1P00488 732 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 PLCG1P19174 1290 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 NAMPTP43490 491 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 NASPP49321 788 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 RAB27AP51159 221 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 SLC12A3P55017 1021 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 SLC39A14Q15043 492 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 LRRC55Q6ZSA7 311 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 CDR2LQ86X02 465 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 SYT2Q8N9I0 419 aaPredicted RBP17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 KIFAP3Q92845 792 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 CALML4Q96GE6 196 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 EPSTI1Q96J88 318 aa17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 EIF2AQ9BY44 585 aaKnown RBP17.01■□□□□ 0.31
CCNDBP1-203ENST00000562553 CWH43Q9H720 699 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms