RNA–Protein interactions for RNA: ENST00000562047.1

EDC3-203, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-203ENST00000562047 AGPAT5Q9NUQ2 364 aa12.43□□□□□ -0.42
EDC3-203ENST00000562047 PLAGL2Q9UPG8 496 aa12.43□□□□□ -0.42
EDC3-203ENST00000562047 PCDHB6Q9Y5E3 794 aa12.43□□□□□ -0.42
EDC3-203ENST00000562047 SPTBN5Q9NRC6 3674 aaKnown RBP12.43□□□□□ -0.42
EDC3-203ENST00000562047 ARHGEF35A5YM69 484 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 MED24O75448 989 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 BMP15O95972 392 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 FGFR4P22455 802 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 PPM1AP35813 382 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 ARL2P36404 184 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 CCT6AP40227 531 aaKnown RBP12.42□□□□□ -0.42
EDC3-203ENST00000562047 PTENP60484 403 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 ARL6IP4Q66PJ3 421 aaKnown RBP12.42□□□□□ -0.42
EDC3-203ENST00000562047 BRAPQ7Z569 592 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 IGSF22Q8N9C0 903 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 CCDC51Q96ER9 411 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
EDC3-203ENST00000562047 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
EDC3-203ENST00000562047 BMP2KQ9NSY1 1161 aaPredicted RBP12.42□□□□□ -0.42
EDC3-203ENST00000562047 TYW1Q9NV66 732 aaKnown RBP12.42□□□□□ -0.42
EDC3-203ENST00000562047 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
EDC3-203ENST00000562047 NCOR1O75376 2440 aa12.42□□□□□ -0.42
EDC3-203ENST00000562047 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 FSD2A1L4K1 749 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 RBAK-RBAKDNI3L0D1 243 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 USO1O60763 962 aaKnown RBP12.41□□□□□ -0.42
EDC3-203ENST00000562047 FGFR1P11362 822 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 KRT17Q04695 432 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 NBR1Q14596 966 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 PPP2R5AQ15172 486 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 PDE12Q6L8Q7 609 aaKnown RBP12.41□□□□□ -0.42
EDC3-203ENST00000562047 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 GLB1LQ6UWU2 654 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 ZNF598Q86UK7 904 aaKnown RBP12.41□□□□□ -0.42
EDC3-203ENST00000562047 NLRC5Q86WI3 1866 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 KLHL23Q8NBE8 558 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 SNX29Q8TEQ0 813 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 UBN1Q9NPG3 1134 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 XPNPEP1Q9NQW7 623 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 FAM105AQ9NUU6 356 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 DNM3Q9UQ16 869 aa12.41□□□□□ -0.42
EDC3-203ENST00000562047 INO80B-WBP1J3KQ70 363 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 GRM6O15303 877 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 CYP11B2P19099 503 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 ALDH7A1P49419 539 aaKnown RBP12.4□□□□□ -0.42
EDC3-203ENST00000562047 GATMP50440 423 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 ATP2C1P98194 919 aaPredicted RBP12.4□□□□□ -0.42
EDC3-203ENST00000562047 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
EDC3-203ENST00000562047 PUS10Q3MIT2 529 aaKnown RBP12.4□□□□□ -0.42
EDC3-203ENST00000562047 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 ZBTB8OSQ8IWT0 167 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 THNSL1Q8IYQ7 743 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 HACE1Q8IYU2 909 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 SPPL3Q8TCT6 385 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 KIFAP3Q92845 792 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 ZNF558Q96NG5 402 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 COL25A1Q9BXS0 654 aaPredicted RBP12.4□□□□□ -0.42
EDC3-203ENST00000562047 NT5C3AQ9H0P0 336 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 POLR3FQ9H1D9 316 aaPredicted RBP12.4□□□□□ -0.42
EDC3-203ENST00000562047 C2orf40Q9H1Z8 148 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 ALG13Q9NP73 1137 aaKnown RBP12.4□□□□□ -0.42
EDC3-203ENST00000562047 KANSL3Q9P2N6 904 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 KIAA1024Q9UPX6 916 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 LZTS1Q9Y250 596 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 GTF3C3Q9Y5Q9 886 aa12.4□□□□□ -0.42
EDC3-203ENST00000562047 COL4A4P53420 1690 aaPredicted RBP12.4□□□□□ -0.42
EDC3-203ENST00000562047 CNTNAP2Q9UHC6 1331 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.39□□□□□ -0.43
EDC3-203ENST00000562047 SLC26A4O43511 780 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 FGF18O76093 207 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 ITGB1P05556 798 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
EDC3-203ENST00000562047 GLRA2P23416 452 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 HOXA11P31270 313 aaPredicted RBP12.39□□□□□ -0.43
EDC3-203ENST00000562047 EFNA5P52803 228 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 CAPSQ13938 189 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 TCEAL5Q5H9L2 206 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 MRPL10Q7Z7H8 261 aaKnown RBP12.39□□□□□ -0.43
EDC3-203ENST00000562047 COLGALT1Q8NBJ5 622 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 URGCPQ8TCY9 931 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 PABPC5Q96DU9 382 aaKnown RBP12.39□□□□□ -0.43
EDC3-203ENST00000562047 IFT74Q96LB3 600 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 PRIMPOLQ96LW4 560 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 AK8Q96MA6 479 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 TRIM6Q9C030 488 aaPredicted RBP12.39□□□□□ -0.43
EDC3-203ENST00000562047 BHMT2Q9H2M3 363 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 CWH43Q9H720 699 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 UBE2ZQ9H832 354 aaPredicted RBP12.39□□□□□ -0.43
EDC3-203ENST00000562047 MINDY3Q9H8M7 445 aa12.39□□□□□ -0.43
EDC3-203ENST00000562047 DDX19AQ9NUU7 478 aaKnown RBP12.39□□□□□ -0.43
EDC3-203ENST00000562047 SPG21Q9NZD8 308 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms