RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MCM3APO60318 1980 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 CCL15-CCL14A0A0B4J2E2 113 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 MOXD2PA6NHM9 499 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 POM121CA8CG34 1229 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 B4DLN1 442 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 AKR1B15C9JRZ8 316 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 MFAP3LO75121 409 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 TBCAO75347 108 aaKnown RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 WFS1O76024 890 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 FARP2O94887 1054 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 FAM13AO94988 1023 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 KIF20AO95235 890 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 ARIH2O95376 493 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 FGFR1OPO95684 399 aaKnown RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 ALDH1A1P00352 501 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 PGK2P07205 417 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 PSAPP07602 524 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 CCNYL3P0C7X3 344 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 TGFB3P10600 412 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 DNM2P50570 870 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 ADKP55263 362 aaKnown RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 NPEPPSP55786 919 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 UBXN1Q04323 297 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 CCL15Q16663 113 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 MAN2A1Q16706 1144 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 ZNF792Q3KQV3 632 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 VWA3BQ502W6 1294 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 ZC2HC1CQ53FD0 456 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 FIGNQ5HY92 759 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 PLA2G4FQ68DD2 849 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 CCAR2Q8N163 923 aaKnown RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 MYCT1Q8N699 235 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 CCDC112Q8NEF3 446 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 ANKRD20A12PQ8NF67 263 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 KCNN1Q92952 543 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 ZIC5Q96T25 663 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 MMP19Q99542 508 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 TSG101Q99816 390 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 BEGAINQ9BUH8 593 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 TIPINQ9BVW5 301 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 KATNBL1Q9H079 304 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 MRPL44Q9H9J2 332 aaKnown RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 EFCC1Q9HA90 598 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 XPNPEP1Q9NQW7 623 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 TYW1Q9NV66 732 aaKnown RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 MAGEC2Q9UBF1 373 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 GABBR1Q9UBS5 961 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 DDX41Q9UJV9 622 aaKnown RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 MAFBQ9Y5Q3 323 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-210ENST00000561817 PLXNB2O15031 1838 aa7.19□□□□□ -1.26
CAPN3-210ENST00000561817 ZNF236Q9UL36 1845 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 PLXNA1Q9UIW2 1896 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 TTC26A0AVF1 554 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 STX10O60499 249 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 LGR5O75473 907 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 GCNT3O95395 438 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 GNA14O95837 355 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 NR3C1P04150 777 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 PLS3P13797 630 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 NDUFV2P19404 249 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 VAMP1P23763 118 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 CASP14P31944 242 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 MTIF2P46199 727 aaKnown RBP7.18□□□□□ -1.26
CAPN3-210ENST00000561817 GCLCP48506 637 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-210ENST00000561817 KLK7P49862 253 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 NCKAP1LP55160 1127 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 GTF2BQ00403 316 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 KCNMA1Q12791 1236 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 NOGQ13253 232 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 TRIM14Q14142 442 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 SYCP1Q15431 976 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 TARBP2Q15633 366 aaKnown RBP7.18□□□□□ -1.26
CAPN3-210ENST00000561817 PTPRNQ16849 979 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 UTP14CQ5TAP6 766 aaKnown RBP7.18□□□□□ -1.26
CAPN3-210ENST00000561817 SWSAP1Q6NVH7 229 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 MAMDC4Q6UXC1 1216 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 SEPT14Q6ZU15 432 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 CYFIP1Q7L576 1253 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 FRMD5Q7Z6J6 570 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 SLC9A9Q8IVB4 645 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 REXO1L1PQ8IX06 675 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 ABRAQ8N0Z2 381 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 GPRC5AQ8NFJ5 357 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 AFAP1L1Q8TED9 768 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 BSNDQ8WZ55 320 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 ATP6V0A1Q93050 837 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 CCDC51Q96ER9 411 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 DNAJC7Q99615 494 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 SH2D3AQ9BRG2 576 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 NTPCRQ9BSD7 190 aaKnown RBP7.18□□□□□ -1.26
CAPN3-210ENST00000561817 NOC4LQ9BVI4 516 aaKnown RBP7.18□□□□□ -1.26
CAPN3-210ENST00000561817 NIFKQ9BYG3 293 aaKnown RBP7.18□□□□□ -1.26
CAPN3-210ENST00000561817 NDST4Q9H3R1 872 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 ZHX3Q9H4I2 956 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 GPRC5CQ9NQ84 441 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 PRDM10Q9NQV6 1147 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 CAPN11Q9UMQ6 739 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 SAMM50Q9Y512 469 aa7.18□□□□□ -1.26
CAPN3-210ENST00000561817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms