RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 FOXN1O15353 648 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 FOXP2O15409 715 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 MAGEB2O15479 319 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 TPD52L2O43399 206 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 ATP2C2O75185 946 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 HSPD1P10809 573 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 TUBP50607 506 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 GUCY2FP51841 1108 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 HPCAP84074 193 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 SLC34A1Q06495 639 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 HNRNPDQ14103 355 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 NONOQ15233 471 aaKnown RBP eCLIP7.82□□□□□ -1.16
CDH1-203ENST00000561751 NAB2Q15742 525 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 CNGA2Q16280 664 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 PTPN21Q16825 1174 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 TMEM132AQ24JP5 1023 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 ASTE1Q2TB18 679 aaPredicted RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 FKBP15Q5T1M5 1219 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 FOXB2Q5VYV0 432 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 TRIM68Q6AZZ1 485 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 PHLDB3Q6NSJ2 640 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 BORAQ6PGQ7 559 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 RGS9BPQ6ZS82 235 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 MARK2Q7KZI7 788 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 ADGRG6Q86SQ4 1221 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 SGMS1Q86VZ5 419 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 IRF2BP1Q8IU81 584 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 IQCF2Q8IXL9 164 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 DDX60Q8IY21 1712 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 FAM186BQ8IYM0 893 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 ST13P4Q8IZP2 240 aaPredicted RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 ADSSL1Q8N142 457 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 RASGEF1CQ8N431 466 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 PROCA1Q8NCQ7 364 aaPredicted RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 LRRC8CQ8TDW0 803 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 DQX1Q8TE96 717 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 TAF4BQ92750 862 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 KCNN1Q92952 543 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 SNX27Q96L92 541 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 RUNDC3BQ96NL0 473 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 HNRNPABQ99729 332 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 ARPC5LQ9BPX5 153 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 ASCC2Q9H1I8 757 aaPredicted RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 ADAM7Q9H2U9 754 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 MAGEF1Q9HAY2 307 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 ABCF3Q9NUQ8 709 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 ZDHHC7Q9NXF8 308 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 THEGQ9P2T0 379 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 STX18Q9P2W9 335 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 DBF4Q9UBU7 674 aaPredicted RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 PPP1R1BQ9UD71 204 aaPredicted RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 SAP30BPQ9UHR5 308 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 NOC2LQ9Y3T9 749 aaKnown RBP7.82□□□□□ -1.16
CDH1-203ENST00000561751 TTLL3Q9Y4R7 772 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 FADS3Q9Y5Q0 445 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 ACTL7BQ9Y614 415 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 LAMA4Q16363 1823 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 TOPAZ1Q8N9V7 1692 aa7.82□□□□□ -1.16
CDH1-203ENST00000561751 MACROD2A1Z1Q3 448 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 GOLGA8BA8MQT2 603 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 F8W8V4 182 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 MATN2O00339 956 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 MAPK13O15264 365 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 RGS16O15492 202 aaPredicted RBP7.81□□□□□ -1.16
CDH1-203ENST00000561751 RAD51CO43502 376 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 RANBP6O60518 1105 aaKnown RBP7.81□□□□□ -1.16
CDH1-203ENST00000561751 ATP9AO75110 1047 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 TCEA3O75764 348 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 ZWINTO95229 277 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 FGFR1OPO95684 399 aaKnown RBP7.81□□□□□ -1.16
CDH1-203ENST00000561751 AFPP02771 609 aaKnown RBP7.81□□□□□ -1.16
CDH1-203ENST00000561751 MMP1P03956 469 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 IFNAR1P17181 557 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 TRIM21P19474 475 aaKnown RBP7.81□□□□□ -1.16
CDH1-203ENST00000561751 KCNA3P22001 575 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 PAX3P23760 479 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 MARK3P27448 753 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 POLD1P28340 1107 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 PTPN4P29074 926 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 HOXD12P35452 270 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 LIFRP42702 1097 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 TRPC1P48995 793 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 KIF11P52732 1056 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 HDAC4P56524 1084 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 ERVK-9P63128 1117 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 GRM2Q14416 872 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 HLTFQ14527 1009 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDH1-203ENST00000561751 MTHFSDQ2M296 383 aaKnown RBP7.81□□□□□ -1.16
CDH1-203ENST00000561751 GJC2Q5T442 439 aaPredicted RBP7.81□□□□□ -1.16
CDH1-203ENST00000561751 SYCP2LQ5T4T6 812 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 RRAGBQ5VZM2 374 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 NFRKBQ6P4R8 1299 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 KSR2Q6VAB6 950 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 OTUD6AQ7L8S5 288 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 LRRC49Q8IUZ0 686 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 EXOC8Q8IYI6 725 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 STAG2Q8N3U4 1231 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 FITM2Q8N6M3 262 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 FAM13CQ8NE31 585 aa7.81□□□□□ -1.16
CDH1-203ENST00000561751 NAT14Q8WUY8 206 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms