RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 PPP6R3Q5H9R7 873 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 ANKRD40Q6AI12 368 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 CDC26Q8NHZ8 85 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 XPO6Q96QU8 1125 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 NRBP2Q9NSY0 501 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 INO80B-WBP1J3KQ70 363 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 KPNA2P52292 529 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 IZUMO3Q5VZ72 239 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 HEXIM2Q96MH2 286 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 C11orf70Q9BRQ4 267 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 WDR11Q9BZH6 1224 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 INO80BQ9C086 356 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 AGPAT5Q9NUQ2 364 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 TMEM260Q9NX78 707 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 USP15Q9Y4E8 981 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 MED7O43513 233 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 KRT38O76015 456 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 SSTR3P32745 418 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 ANKMY2Q8IV38 441 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 BATF3Q9NR55 127 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 A0A1W2PQC6 194 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 KCNJ6P48051 423 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 DAB2P98082 770 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 MECOMQ03112 1051 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 PFKFB3Q16875 520 aaPredicted RBP10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 ACAD11Q709F0 780 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 PROM2Q8N271 834 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 NCLNQ969V3 563 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 PPP1R36Q96LQ0 422 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 GCNAQ96QF7 691 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 KLC2Q9H0B6 622 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 ZC4H2Q9NQZ6 224 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 HEY1Q9Y5J3 304 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 PBRM1Q86U86 1689 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 PEX3P56589 373 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 KCTD2Q14681 263 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 STOX1Q6ZVD7 989 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 TRPM8Q7Z2W7 1104 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 KIRREL3Q8IZU9 778 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 PPP1R16BQ96T49 567 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 PALMDQ9NP74 551 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 DPYSL4O14531 572 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 KDM1AO60341 852 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 CARSP49589 748 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 MTERF2Q49AM1 385 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 RABGAP1LQ5R372 815 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 STAMBPL1Q96FJ0 436 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 ASAP1Q9ULH1 1129 aa10.87□□□□□ -0.67
GTF3C1-202ENST00000561623 hCG_1984214I3L0E3 225 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 IGF2BP3O00425 579 aaKnown RBP eCLIP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 CDC37Q16543 378 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 ZNF713Q8N859 430 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 ATP6V0A1Q93050 837 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 RBM41Q96IZ5 413 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 FAM81BQ96LP2 452 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 SH3GLB2Q9NR46 395 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 EHD2Q9NZN4 543 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 MID2Q9UJV3 735 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 FBXO2Q9UK22 296 aaPredicted RBP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 E2F6O75461 281 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 SCP2P22307 547 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 IGFBP4P22692 258 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 BYSLQ13895 437 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 NR1I3Q14994 352 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 PTGISQ16647 500 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 GRAMD1AQ96CP6 724 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 ABCF3Q9NUQ8 709 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 POTEB3A0JP26 581 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 POTECB2RU33 542 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 COPS2P61201 443 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 TTC37Q6PGP7 1564 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 POTEBQ6S5H4 581 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 DDX42Q86XP3 938 aaKnown RBP eCLIP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 ERP27Q96DN0 273 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 INTS2Q9H0H0 1204 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 UBN1Q9NPG3 1134 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 L3MBTL1Q9Y468 752 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 RAD51CO43502 376 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 AGTP01019 485 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 PYGBP11216 843 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 CCND1P24385 295 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 SYCP2LQ5T4T6 812 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 LRIG3Q6UXM1 1119 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 PGBD3Q8N328 593 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 SLC7A3Q8WY07 619 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 TRABDQ9H4I3 376 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 NOD2Q9HC29 1040 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 NGRNQ9NPE2 291 aaKnown RBP10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 ATP10AO60312 1499 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 CCNYL1Q8N7R7 359 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 MDM1Q8TC05 714 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 DNAJC9Q8WXX5 260 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 DLGAP2Q9P1A6 1054 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 SNX5Q9Y5X3 404 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 SERPINB4P48594 390 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 KLK7P49862 253 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 HIC1Q14526 733 aa10.86□□□□□ -0.67
GTF3C1-202ENST00000561623 PPP1R2P3Q6NXS1 205 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms