RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 HSPA5P11021 654 aaKnown RBP4.05□□□□□ -1.76
SPG11-225ENST00000561391 NAT2P11245 290 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 SRFP11831 508 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 MYOGP15173 224 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 IL9P15248 144 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 HK2P52789 917 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 RABGGTBP53611 331 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 IFRD2Q12894 506 aaPredicted RBP4.05□□□□□ -1.76
SPG11-225ENST00000561391 AIMP1Q12904 312 aaKnown RBP4.05□□□□□ -1.76
SPG11-225ENST00000561391 TNFAIP1Q13829 316 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 RAB30Q15771 203 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 NFE2L2Q16236 605 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 CWF19L1Q69YN2 538 aaKnown RBP4.05□□□□□ -1.76
SPG11-225ENST00000561391 SPATC1Q76KD6 591 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 COPS6Q7L5N1 327 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 CREG2Q8IUH2 290 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 CERS5Q8N5B7 392 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 RMDN1Q96DB5 314 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 ZDHHC15Q96MV8 337 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 DNAJC7Q99615 494 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 PRRX2Q99811 253 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 GPR62Q9BZJ7 368 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 COA1Q9GZY4 146 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 KLHL25Q9H0H3 589 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 CCDC113Q9H0I3 377 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 PIF1Q9H611 641 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 WHRNQ9P202 907 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 APEX2Q9UBZ4 518 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 SUSD2Q9UGT4 822 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 DUSP13Q9UII6 198 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 CNOT6Q9ULM6 557 aaKnown RBP4.05□□□□□ -1.76
SPG11-225ENST00000561391 AKT3Q9Y243 479 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 YBX2Q9Y2T7 364 aaKnown RBP4.05□□□□□ -1.76
SPG11-225ENST00000561391 COL4A1P02462 1669 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 CFAP47Q6ZTR5 3102 aa4.05□□□□□ -1.76
SPG11-225ENST00000561391 LRRC37AA6NMS7 1700 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 ATRNL1Q5VV63 1379 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 COL4A6Q14031 1691 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 ZNF318Q5VUA4 2279 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 PRR23AA6NEV1 266 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 AGRPO00253 132 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 VAMP4O75379 141 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 KCNH1O95259 989 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 ANXA1P04083 346 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 ADCYAP1R1P41586 468 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 SSRP1Q08945 709 aaKnown RBP4.04□□□□□ -1.76
SPG11-225ENST00000561391 DCTN1Q14203 1278 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 CCL14Q16627 93 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 PROSER3Q2NL68 480 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 DPY19L1Q2PZI1 675 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 SLC10A6Q3KNW5 377 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 ANO1Q5XXA6 986 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 C16orf59Q7L2K0 433 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 MCM10Q7L590 875 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 THAP5Q7Z6K1 395 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 MORC1Q86VD1 984 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 TSPYL5Q86VY4 417 aaPredicted RBP4.04□□□□□ -1.76
SPG11-225ENST00000561391 ADSSL1Q8N142 457 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 TCTN2Q96GX1 697 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 YTHDC1Q96MU7 727 aaKnown RBP4.04□□□□□ -1.76
SPG11-225ENST00000561391 KCNC2Q96PR1 638 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 POLR3GLQ9BT43 218 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 RTEL1Q9NZ71 1219 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 TMEM59LQ9UK28 342 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 SF3B6Q9Y3B4 125 aaKnown RBP4.04□□□□□ -1.76
SPG11-225ENST00000561391 MSRB2Q9Y3D2 182 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 PSME4Q14997 1843 aa4.04□□□□□ -1.76
SPG11-225ENST00000561391 EPG5Q9HCE0 2579 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 DNAJC25-GNG10A0A024R161 153 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 H0Y8X5 98 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 DNM1LO00429 736 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 IRS4O14654 1257 aaPredicted RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 SEMA7AO75326 666 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 ITGAVP06756 1048 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 SYPP08247 313 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 CLTBP09497 229 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 ZKSCAN1P17029 563 aaPredicted RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 EIF2S2P20042 333 aaKnown RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 KLRK1P26718 216 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 CCT4P50991 539 aaKnown RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 CACNB3P54284 484 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 PCBP3P57721 371 aaKnown RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 ERVFC1P60507 584 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 DLG4P78352 724 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 EGR3Q06889 387 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 RASGRF1Q13972 1273 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 ZNF385BQ569K4 471 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 HSP90AB3PQ58FF7 597 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 RALGPS1Q5JS13 557 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 EPHA10Q5JZY3 1008 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 TMEM240Q5SV17 173 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 CRTC3Q6UUV7 619 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 ZNF365Q70YC5 407 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 FASTKD5Q7L8L6 764 aaKnown RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 ZNF605Q86T29 641 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 ANKRD18AQ8IVF6 992 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 SUGP1Q8IWZ8 645 aaKnown RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 ZNF655Q8N720 491 aaPredicted RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 DAGLBQ8NCG7 672 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 SLC44A5Q8NCS7 719 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms