RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 CAPSQ13938 189 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 DSC3Q14574 896 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 KSR1Q8IVT5 923 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 ZBTB8OSQ8IWT0 167 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 DAW1Q8N136 415 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 ASAP3Q8TDY4 903 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 NLRP4Q96MN2 994 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 RUSC1Q9BVN2 902 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 FZD8Q9H461 694 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 ELAC1Q9H777 363 aaKnown RBP12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 KCNH3Q9ULD8 1083 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
SNRPCP18-201ENST00000560619 TMEM265A0A087WTH1 108 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 HIP1RO75146 1068 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 PLS3P13797 630 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 PFKFB1P16118 471 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 LIG1P18858 919 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 FAM160A1Q05DH4 1040 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 NFX1Q12986 1120 aaKnown RBP12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 GIT2Q14161 759 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 MCM6Q14566 821 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 SLC24A5Q71RS6 500 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 GPBP1Q86WP2 473 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 CRIPAKQ8N1N5 446 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 LRRC15Q8TF66 581 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 TOP1MTQ969P6 601 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 CCDC34Q96HJ3 373 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 PLIN2Q99541 437 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 OSBPL7Q9BZF2 842 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 GOLPH3LQ9H4A5 285 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 PARVGQ9HBI0 331 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 GPRC5CQ9NQ84 441 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 PRMT7Q9NVM4 692 aaPredicted RBP12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 ARHGAP28Q9P2N2 729 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 SEL1LQ9UBV2 794 aa12.31□□□□□ -0.44
SNRPCP18-201ENST00000560619 A0A087X0B3 334 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 A0A0U1RQF3 1178 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 FRMD3A2A2Y4 597 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 C9IYK1 514 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 ACKR2O00590 384 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 POLR2DO15514 142 aaKnown RBP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 KINO60870 393 aaKnown RBP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 ZNF623O75123 536 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 EOMESO95936 686 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 SSBP05455 408 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 STAG3L1P0CL83 205 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 GAP43P17677 238 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 SYKP43405 635 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 NPTX2P47972 431 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 SARSP49591 514 aaKnown RBP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 RAB27AP51159 221 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 MBTD1Q05BQ5 628 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 RAB30Q15771 203 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 MAPK6Q16659 721 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 HABP4Q5JVS0 413 aaKnown RBP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 CAVIN1Q6NZI2 390 aaKnown RBP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 CATSPER4Q7RTX7 472 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 RTN4RL1Q86UN2 441 aaPredicted RBP12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 CNNM3Q8NE01 707 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 DEPTORQ8TB45 409 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 DDX12PQ92771 950 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 C7orf25Q9BPX7 421 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 REEP2Q9BRK0 252 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 TMX1Q9H3N1 280 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 ST6GALNAC4Q9H4F1 302 aa12.3□□□□□ -0.44
SNRPCP18-201ENST00000560619 COL4A6Q14031 1691 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 A0A1B0GUA9 196 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 DENND3A2RUS2 1198 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 LRRIQ4A6NIV6 560 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 ZBBXA8MT70 800 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 K7ERI5 159 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 ERLIN2O94905 339 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 GJB5O95377 273 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 HOXA11P31270 313 aaPredicted RBP12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 NDUFA8P51970 172 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 NCKAP1LP55160 1127 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 AMHR2Q16671 573 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 TCTN1Q2MV58 587 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 FAM109BQ6ICB4 259 aaPredicted RBP12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 KANK3Q6NY19 840 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 NOTUMQ6P988 496 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 NPAS4Q8IUM7 802 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 HERC6Q8IVU3 1022 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 ELOA2Q8IYF1 753 aaPredicted RBP12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 CEP57L1Q8IYX8 460 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 PDILTQ8N807 584 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 BSNDQ8WZ55 320 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 DNAJC19Q96DA6 116 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 ADAM2Q99965 735 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 CCDC113Q9H0I3 377 aa12.29□□□□□ -0.44
SNRPCP18-201ENST00000560619 MINDY3Q9H8M7 445 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms