RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ZSWIM8A7E2V4 1837 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 A0A0U1RQJ8 604 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 FAM187AA6NFU0 413 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ZNF233A6NK53 670 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ZBTB5O15062 677 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ZNF185O15231 689 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 GOLGA8HP0CJ92 632 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 FDX1P10109 184 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 MYBP10242 640 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 MYBL2P10244 700 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 CTGFP29279 349 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 MATR3P43243 847 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCDC33-209ENST00000560565 PSEN1P49768 467 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 MARSP56192 900 aaKnown RBP9.27□□□□□ -0.93
CCDC33-209ENST00000560565 NPY5RQ15761 445 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ASIC2Q16515 512 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 FAM110CQ1W6H9 321 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 SLC35G1Q2M3R5 365 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ANKRD20A8PQ5CZ79 823 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 MIIPQ5JXC2 388 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 SYDE2Q5VT97 1194 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 KLHDC7AQ5VTJ3 777 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 NFRKBQ6P4R8 1299 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 HEATR3Q7Z4Q2 680 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 CLEC10AQ8IUN9 316 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ADGRF4Q8IZF3 695 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 C4orf32Q8N8J7 132 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 N4BP2L2Q92802 583 aaPredicted RBP9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ARL8AQ96BM9 186 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 MIEF2Q96C03 454 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 CHMP6Q96FZ7 201 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 C12orf42Q96LP6 360 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCDC33-209ENST00000560565 TLR10Q9BXR5 811 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 NT5C3AQ9H0P0 336 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 JMJD4Q9H9V9 463 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 RBM12Q9NTZ6 932 aaKnown RBP9.27□□□□□ -0.93
CCDC33-209ENST00000560565 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCDC33-209ENST00000560565 AIPL1Q9NZN9 384 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ARHGAP20Q9P2F6 1191 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 SRRDQ9UH36 339 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 FBXL5Q9UKA1 691 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 TTC7AQ9ULT0 858 aaPredicted RBP9.27□□□□□ -0.93
CCDC33-209ENST00000560565 NFU1Q9UMS0 254 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 MTMR7Q9Y216 660 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 COL4A3BPQ9Y5P4 624 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 CAPN6Q9Y6Q1 641 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 FRMPD2Q68DX3 1309 aaPredicted RBP9.27□□□□□ -0.93
CCDC33-209ENST00000560565 RANBP2P49792 3224 aaKnown RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 MUC3AQ02505 3323 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 A0A1W2PRG0 241 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 LRRC53A6NM62 1247 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L15C9J2P7 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L13C9JLJ4 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L11C9JVI0 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L18D6R9N7 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L22D6RA61 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L17D6RBQ6 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L19D6RCP7 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L20D6RJB6 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 E7ENQ6 273 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 RNF225M0QZC1 329 aaPredicted RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 M0R2N6 131 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 ABLIM1O14639 778 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 WDR46O15213 610 aaKnown RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 ZMYND10O75800 440 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 ATP5HO75947 161 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 ATP1A2P50993 1020 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP11P51784 963 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 STAT2P52630 851 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 CLNS1AP54105 237 aaKnown RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 NAPAP54920 295 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 SH3BGRP55822 239 aaPredicted RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 CYP27A1Q02318 531 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 ADCY2Q08462 1091 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 USP17L24Q0WX57 530 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 DHX34Q14147 1143 aaKnown RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 ASTE1Q2TB18 679 aaPredicted RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 C6orf118Q5T5N4 469 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 LRCH2Q5VUJ6 765 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 KRT79Q5XKE5 535 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 ANKRD40Q6AI12 368 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 NEK8Q86SG6 692 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 FUKQ8N0W3 1084 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 TEX9Q8N6V9 391 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 MAB21L3Q8N8X9 362 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 TSEN2Q8NCE0 465 aaKnown RBP9.26□□□□□ -0.93
CCDC33-209ENST00000560565 RAET1EQ8TD07 263 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 TATDN2Q93075 761 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 COL26A1Q96A83 441 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 PGM2Q96G03 612 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 SEC16BQ96JE7 1060 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 GDAP1L1Q96MZ0 367 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 PIGSQ96S52 555 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 MTRQ99707 1265 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 TANGO6Q9C0B7 1094 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 UBA5Q9GZZ9 404 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 CENPHQ9H3R5 247 aa9.26□□□□□ -0.93
CCDC33-209ENST00000560565 PLEKHA4Q9H4M7 779 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms