RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 DDX11L8A8MPP1 907 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 CCNT1O60563 726 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 BCAR1P56945 870 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 ANKRD54Q6NXT1 300 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 NSUN7Q8NE18 718 aaKnown RBP11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 MICAL1Q8TDZ2 1067 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 PHF7Q9BWX1 381 aaPredicted RBP11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 ZBP1Q9H171 429 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 S1PR5Q9H228 398 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 MINDY3Q9H8M7 445 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 CHST12Q9NRB3 414 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 SPG21Q9NZD8 308 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 ORC3Q9UBD5 711 aaPredicted RBP11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 CDH22Q9UJ99 828 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
SNRPA1-212ENST00000560496 VPS13AQ96RL7 3174 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 C2orf71A6NGG8 1288 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 NT5C1B-RDH14C9J2C7 533 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 ZC3H11AO75152 810 aaKnown RBP eCLIP11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 XBP1P17861 261 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 DNM2P50570 870 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 RAB27AP51159 221 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 CDC42EP1Q00587 391 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 EMC2Q15006 297 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 EPHA7Q15375 998 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 ME3Q16798 604 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 LONRF3Q496Y0 759 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 TWF2Q6IBS0 349 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 NCAPH2Q6IBW4 605 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 LLGL2Q6P1M3 1020 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 AGMOQ6ZNB7 445 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 CATSPER4Q7RTX7 472 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 NECAB1Q8N987 351 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 SLC7A3Q8WY07 619 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 RSPH1Q8WYR4 309 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 DYDC2Q96IM9 177 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 CEP170P1Q96L14 293 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 JPH2Q9BR39 696 aaPredicted RBP11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 VN1R3Q9BXE9 311 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 NRDE2Q9H7Z3 1164 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 NGRNQ9NPE2 291 aaKnown RBP11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 XPNPEP1Q9NQW7 623 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 TBC1D13Q9NVG8 400 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 RGL1Q9NZL6 768 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 DNAJB4Q9UDY4 337 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 PPME1Q9Y570 386 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 HCFC2Q9Y5Z7 792 aa11.36□□□□□ -0.59
SNRPA1-212ENST00000560496 ZBTB39O15060 712 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 GAS2O43903 313 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 JAK2O60674 1132 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 ZNF623O75123 536 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 YWHABP31946 246 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 KRT2P35908 639 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 RFC5P40937 340 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 TECP42680 631 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 POLGP54098 1239 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 CYP4A11Q02928 519 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 SMC1AQ14683 1233 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 ANKRD1Q15327 319 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 NOMO2Q5JPE7 1267 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 UBXN11Q5T124 520 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 TMC7Q7Z402 723 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 PSPC1Q8WXF1 523 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 EDAQ92838 391 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 TMEM143Q96AN5 459 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 NAP1L4Q99733 375 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 APOL5Q9BWW9 433 aa11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 INO80BQ9C086 356 aaPredicted RBP11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 PUF60Q9UHX1 559 aaKnown RBP11.35□□□□□ -0.59
SNRPA1-212ENST00000560496 DKC1O60832 514 aaKnown RBP eCLIP11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 CLASP2O75122 1294 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 OFD1O75665 1012 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 SRGAP2BP0DMP2 458 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 SKIP12755 728 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 HOXA11P31270 313 aaPredicted RBP11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 SLC11A1P49279 550 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 AFF1P51825 1210 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 KRT17Q04695 432 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 LAMTOR4Q0VGL1 99 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 CTTNQ14247 550 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 GLB1LQ6UWU2 654 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 SRGAP1Q7Z6B7 1085 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 SLFN12Q8IYM2 578 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 MRPL43Q8N983 215 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 FEZF2Q8TBJ5 459 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 PRPF31Q8WWY3 499 aaKnown RBP11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 AUTS2Q8WXX7 1259 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 WASF1Q92558 559 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 CASP10Q92851 521 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 IGSF21Q96ID5 467 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 POMKQ9H5K3 350 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 INPP5FQ9Y2H2 1132 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 IRAK3Q9Y616 596 aa11.34□□□□□ -0.59
SNRPA1-212ENST00000560496 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.33□□□□□ -0.6
SNRPA1-212ENST00000560496 TSPAN1O60635 241 aa11.33□□□□□ -0.6
SNRPA1-212ENST00000560496 LYPLA2O95372 231 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms