RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CLCN5P51795 746 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 GIT2Q14161 759 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 NECTIN1Q15223 517 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 PFKFB3Q16875 520 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 OTOP3Q7RTS5 596 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 FAM193BQ96PV7 902 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 TEKT3Q9BXF9 490 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 EMILIN2Q9BXX0 1053 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 SFXN1Q9H9B4 322 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 SPTBN4Q9H254 2564 aa11.82□□□□□ -0.52
CDC42BPB-207ENST00000560492 VPS13AQ96RL7 3174 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 CCDC196A0A1B0GTZ2 297 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 CARNS1A5YM72 827 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 CTSAP10619 480 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 SKIP12755 728 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 GNA11P29992 359 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 CDC27P30260 824 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 PHKA2P46019 1235 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 ID4P47928 161 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 FUT2Q10981 343 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 NOMO2Q5JPE7 1267 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 LRCH2Q5VUJ6 765 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 DHX32Q7L7V1 743 aaKnown RBP11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 CATSPER4Q7RTX7 472 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 DDX53Q86TM3 631 aaKnown RBP11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 PPFIBP1Q86W92 1011 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 TMEM173Q86WV6 379 aaPredicted RBP11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 SIX5Q8N196 739 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 URGCPQ8TCY9 931 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 BICD2Q8TD16 824 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 IGSF21Q96ID5 467 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 NLRP4Q96MN2 994 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 HINFPQ9BQA5 517 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
CDC42BPB-207ENST00000560492 A0A087WZ62 844 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 C2CD2LO14523 706 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 ZNF862O60290 1169 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 MYBP10242 640 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 SFNP31947 248 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 GBP2P32456 591 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 ADD1P35611 737 aaKnown RBP11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 JAK3P52333 1124 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 POLGP54098 1239 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 TDGQ13569 410 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 ANGPT1Q15389 498 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 UGCGQ16739 394 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 MIER3Q7Z3K6 550 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 RHPN2Q8IUC4 686 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 SH2D3AQ9BRG2 576 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 FDXACB1Q9BRP7 624 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 INO80BQ9C086 356 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 NRDE2Q9H7Z3 1164 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 DNAJB4Q9UDY4 337 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 FAM186AA6NE01 2351 aa11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
CDC42BPB-207ENST00000560492 ESYT2A0FGR8 921 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 TMEM150BA6NC51 233 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 ADAMTS3O15072 1205 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 GALTP07902 379 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 CFHP08603 1231 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 SLC11A1P49279 550 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 RAB27AP51159 221 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 CDC42EP1Q00587 391 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 DRP2Q13474 957 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 KRT32Q14532 448 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 CWF19L1Q69YN2 538 aaKnown RBP11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 ELMSAN1Q6PJG2 1045 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 LINC01465Q8N7H1 131 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 CCDC148Q8NFR7 591 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 SLC22A17Q8WUG5 538 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 PHKBQ93100 1093 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 RTP3Q9BQQ7 232 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 ZMYND12Q9H0C1 365 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 UNC45AQ9H3U1 944 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 CHST12Q9NRB3 414 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 MRPL17Q9NRX2 175 aaKnown RBP11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 FAM105AQ9NUU6 356 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 MYO15AQ9UKN7 3530 aa11.79□□□□□ -0.52
CDC42BPB-207ENST00000560492 RIF1Q5UIP0 2472 aaKnown RBP11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 MEIS3P2A8K0S8 358 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 DDX11L8A8MPP1 907 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 MSH4O15457 936 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 PI15O43692 258 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 URODP06132 367 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 AOC1P19801 751 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 AK2P54819 239 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 EXOSC10Q01780 885 aaKnown RBP11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 NONOQ15233 471 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 PTPN14Q15678 1187 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 ADCK5Q3MIX3 580 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 SPECC1Q5M775 1068 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 ERMP1Q7Z2K6 904 aa11.78□□□□□ -0.52
CDC42BPB-207ENST00000560492 GPR149Q86SP6 731 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms