RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 IFT74Q96LB3 600 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 ADAM2Q99965 735 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 NFKBIZQ9BYH8 718 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 TSPYL2Q9H2G4 693 aaPredicted RBP17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 KCNH3Q9ULD8 1083 aa17.15■□□□□ 0.34
LYSMD2-204ENST00000560491 DENND3A2RUS2 1198 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 MYMKA6NI61 221 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 CCDC169A6NNP5 214 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 PBX2P40425 430 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 NPTX2P47972 431 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 DMP1Q13316 513 aaPredicted RBP17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 GIT2Q14161 759 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 DYMQ7RTS9 669 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 HERC6Q8IVU3 1022 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 ZBTB8OSQ8IWT0 167 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 FSIP1Q8NA03 581 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 IQUBQ8NA54 791 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 DEPTORQ8TB45 409 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 GOLPH3LQ9H4A5 285 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 AGPAT5Q9NUQ2 364 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 PIN4Q9Y237 131 aaKnown RBP17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 HPSEQ9Y251 543 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 TTC3P53804 2025 aa17.14■□□□□ 0.33
LYSMD2-204ENST00000560491 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 A0A1W2PQ27 194 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 A0A1W2PQ64 194 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 A0A1W2PQD8 194 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 B4GALT5O43286 388 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 TSPAN1O60635 241 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 ERLIN2O94905 339 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 UPP2O95045 317 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 LIG1P18858 919 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 AMHR2Q16671 573 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 PHOSPHO2Q8TCD6 241 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 DDX12PQ92771 950 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 LRCH3Q96II8 777 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 CPB2Q96IY4 423 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 C2orf40Q9H1Z8 148 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 ZHX3Q9H4I2 956 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 RGS18Q9NS28 235 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 ODF2LQ9ULJ1 636 aa17.13■□□□□ 0.33
LYSMD2-204ENST00000560491 SLC16A4O15374 487 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 TBCAO75347 108 aaKnown RBP17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 FAM13AO94988 1023 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 EDN1P05305 212 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 PLS3P13797 630 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 MYOGP15173 224 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 ZSCAN20P17040 1043 aaPredicted RBP17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 NDUFA8P51970 172 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 PBX4Q9BYU1 374 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 CCDC113Q9H0I3 377 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 TNMDQ9H2S6 317 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 CUEDC2Q9H467 287 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 KMT5AQ9NQR1 393 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 KBTBD4Q9NVX7 518 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 USP20Q9Y2K6 914 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 YBX2Q9Y2T7 364 aaKnown RBP17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 COL4A6Q14031 1691 aa17.12■□□□□ 0.33
LYSMD2-204ENST00000560491 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 FAM237AA0A1B0GTK4 181 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 TTLL13PA6NNM8 815 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 C9IYK1 514 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 ACTN4O43707 911 aaKnown RBP17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 GJB5O95377 273 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 HOXA11P31270 313 aaPredicted RBP17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 ZNF131P52739 623 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 SMAD3P84022 425 aaKnown RBP17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 MYCT1Q8N699 235 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 TOP1MTQ969P6 601 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 C17orf75Q9HAS0 396 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 CHST12Q9NRB3 414 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 C1orf112Q9NSG2 853 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 PRMT7Q9NVM4 692 aaPredicted RBP17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 ARHGAP28Q9P2N2 729 aa17.11■□□□□ 0.33
LYSMD2-204ENST00000560491 TLL1O43897 1013 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 PRKCBP05771 671 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 ARF4P18085 180 aaPredicted RBP17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 CASP1P29466 404 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 SYKP43405 635 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 AFMP43652 599 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 MAPK6Q16659 721 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 LONRF3Q496Y0 759 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 TAS1R3Q7RTX0 852 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 CDR2LQ86X02 465 aaPredicted RBP17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 GRAMD1CQ8IYS0 662 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 SPIRE2Q8WWL2 714 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 ZBED2Q9BTP6 218 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 FZD8Q9H461 694 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 LARSQ9P2J5 1176 aaKnown RBP17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 PHLPP2Q6ZVD8 1323 aa17.1■□□□□ 0.33
LYSMD2-204ENST00000560491 CNTNAP2Q9UHC6 1331 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms