RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 MBTPS1Q14703 1052 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 EMC2Q15006 297 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 TMEM132AQ24JP5 1023 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 PLEKHG4Q58EX7 1191 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 FBXO47Q5MNV8 452 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 PPP2R2DQ66LE6 453 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 FAM109BQ6ICB4 259 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 ANO5Q75V66 913 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 TMCO2Q7Z6W1 182 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 C4orf19Q8IY42 314 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 KIAA0319LQ8IZA0 1049 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 TMEM143Q96AN5 459 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 MTMR9Q96QG7 549 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 YME1L1Q96TA2 773 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 REPIN1Q9BWE0 567 aaKnown RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 NIFKQ9BYG3 293 aaKnown RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 PBX4Q9BYU1 374 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 NKX2-4Q9H2Z4 354 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 ATP6V0A4Q9HBG4 840 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 GBF1Q92538 1859 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 ZBTB42B2RXF5 422 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 ZBTB39O15060 712 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 GPR182O15218 404 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 HOXA2O43364 376 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 MAFO75444 373 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-219ENST00000560483 SLITRK3O94933 977 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 BMP15O95972 392 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 CXCL10P02778 98 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 MYOGP15173 224 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 RFC5P40937 340 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 DEFB103AP81534 67 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 SPIRE1Q08AE8 756 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 SF3A1Q15459 793 aaKnown RBP8.9□□□□□ -0.98
LRRC28-219ENST00000560483 FAM26DQ5JW98 314 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 FAM102BQ5T8I3 360 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 B3GNT9Q6UX72 402 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.9□□□□□ -0.98
LRRC28-219ENST00000560483 HERC6Q8IVU3 1022 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 USP38Q8NB14 1042 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 RNF169Q8NCN4 708 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 TCP11Q8WWU5 503 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 PSPC1Q8WXF1 523 aaKnown RBP8.9□□□□□ -0.98
LRRC28-219ENST00000560483 NACC1Q96RE7 527 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 PLIN2Q99541 437 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 GCOM2Q9BZD3 368 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-219ENST00000560483 CERS4Q9HA82 394 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 TUFT1Q9NNX1 390 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 DDX19AQ9NUU7 478 aaKnown RBP8.9□□□□□ -0.98
LRRC28-219ENST00000560483 WRAP73Q9P2S5 460 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-219ENST00000560483 MTUS1Q9ULD2 1270 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 PADI3Q9ULW8 664 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 KIAA1024Q9UPX6 916 aa8.9□□□□□ -0.98
LRRC28-219ENST00000560483 NOC2LQ9Y3T9 749 aaKnown RBP8.9□□□□□ -0.98
LRRC28-219ENST00000560483 MICAL3Q7RTP6 2002 aa8.9□□□□□ -0.99
LRRC28-219ENST00000560483 PP2D1A8MPX8 630 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 H3BM21 787 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 MED24O75448 989 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 CSDE1O75534 798 aaKnown RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 CA3P07451 260 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 LIG1P18858 919 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 NCLP19338 710 aaKnown RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 FGFR4P22455 802 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 SFPQP23246 707 aaKnown RBP eCLIP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 MARCKSP29966 332 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 CDC25AP30304 524 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 TXLNAP40222 546 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 UBA7P41226 1012 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 CRYBB1P53674 252 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 WNT7BP56706 349 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 CDC42EP1Q00587 391 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 MGAT3Q09327 533 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 TFDP1Q14186 410 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 STK38Q15208 465 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 TPRNQ4KMQ1 711 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 SPOUT1Q5T280 376 aaKnown RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 FAM173BQ6P4H8 233 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 CATSPER4Q7RTX7 472 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 RPAINQ86UA6 219 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 CATSPER3Q86XQ3 398 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 KSR1Q8IVT5 923 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 MICALL1Q8N3F8 863 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 PHOSPHO2Q8TCD6 241 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 CALML4Q96GE6 196 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 ZNF396Q96N95 335 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 POLR3CQ9BUI4 534 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 FTHL17Q9BXU8 183 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 INO80BQ9C086 356 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 ZSCAN16Q9H4T2 348 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 ZNF576Q9H609 170 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 AGO3Q9H9G7 860 aaKnown RBP8.89□□□□□ -0.99
LRRC28-219ENST00000560483 ANKEF1Q9NU02 776 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 ST3GAL5Q9UNP4 418 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 DNM3Q9UQ16 869 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 PPME1Q9Y570 386 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 PCDHA11Q9Y5I1 949 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 COL4A3BPQ9Y5P4 624 aa8.89□□□□□ -0.99
LRRC28-219ENST00000560483 KDM3AQ9Y4C1 1321 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 A0A087WZ62 844 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 LRRIQ4A6NIV6 560 aa8.88□□□□□ -0.99
LRRC28-219ENST00000560483 SOBPA7XYQ1 873 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms