RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 NFKBIZQ9BYH8 718 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 SUGCTQ9HAC7 445 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 METTL14Q9HCE5 456 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 SUCLA2Q9P2R7 463 aaPredicted RBP9.45□□□□□ -0.9
TRAF3-209ENST00000560463 IMPACTQ9P2X3 320 aa9.45□□□□□ -0.9
TRAF3-209ENST00000560463 LRRIQ4A6NIV6 560 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 N4BP3O15049 544 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 KIAA0391O15091 583 aaKnown RBP9.44□□□□□ -0.9
TRAF3-209ENST00000560463 MAPK13O15264 365 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 ADAMTS4O75173 837 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 NR3C1P04150 777 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 MYL3P08590 195 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 GNAT1P11488 350 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 GARTP22102 1010 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 GRK4P32298 578 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 BEX3Q00994 111 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 KCNA1Q09470 495 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 LAMTOR4Q0VGL1 99 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 STRN3Q13033 797 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 TRIM32Q13049 653 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
TRAF3-209ENST00000560463 CAPSQ13938 189 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 MAN2A1Q16706 1144 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 CCDC40Q4G0X9 1142 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 HS1BP3Q53T59 392 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 GNASQ5JWF2 1037 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 CDCA2Q69YH5 1023 aaPredicted RBP9.44□□□□□ -0.9
TRAF3-209ENST00000560463 MTHFD1LQ6UB35 978 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 ZBTB8OSQ8IWT0 167 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 METTL13Q8N6R0 699 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 DEPTORQ8TB45 409 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 ASAP3Q8TDY4 903 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 TRAPPC12Q8WVT3 735 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 NAP1L5Q96NT1 182 aaPredicted RBP9.44□□□□□ -0.9
TRAF3-209ENST00000560463 MTG1Q9BT17 334 aaPredicted RBP9.44□□□□□ -0.9
TRAF3-209ENST00000560463 HMX1Q9NP08 348 aaPredicted RBP9.44□□□□□ -0.9
TRAF3-209ENST00000560463 XPNPEP3Q9NQH7 507 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 AGPAT3Q9NRZ7 376 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 DMAC2Q9NW81 257 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 WBP1LQ9NX94 342 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 FRMD4BQ9Y2L6 1034 aa9.44□□□□□ -0.9
TRAF3-209ENST00000560463 HTTP42858 3142 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 ITIH6Q6UXX5 1313 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 ADGRA3Q8IWK6 1321 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 SMIM35A0A1B0GVV1 85 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 A0A1W2PQC6 194 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 MBLAC1A4D2B0 266 aaPredicted RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 CLIC2O15247 247 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 PIGRP01833 764 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 RPLP2P05387 115 aaKnown RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 SMIM10L2AP0DMW4 78 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 SMIM10L2BP0DMW5 78 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 EPB41P11171 864 aaKnown RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 CCND3P30281 292 aaPredicted RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 HOXC8P31273 242 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 PSMC2P35998 433 aaKnown RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 IGBP1P78318 339 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 ADAM17P78536 824 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 MARCH8Q5T0T0 291 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 SLFN12LQ6IEE8 588 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 NFRKBQ6P4R8 1299 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 RNF180Q86T96 592 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 RHPN2Q8IUC4 686 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 CREBRFQ8IUR6 639 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 VSTM4Q8IW00 320 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 TRIM59Q8IWR1 403 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 LRRC71Q8N4P6 559 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 KLHDC9Q8NEP7 349 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 LENG1Q96BZ8 264 aaPredicted RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 TRIM44Q96DX7 344 aaPredicted RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 NOC4LQ9BVI4 516 aaKnown RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 VPS16Q9H269 839 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 DDX20Q9UHI6 824 aaKnown RBP9.43□□□□□ -0.9
TRAF3-209ENST00000560463 TRIM17Q9Y577 477 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 STYXL1Q9Y6J8 313 aa9.43□□□□□ -0.9
TRAF3-209ENST00000560463 DNAH12Q6ZR08 3092 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 C17orf102A2RUQ5 167 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 LGALS16A8MUM7 142 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 HNRNPDLO14979 420 aaKnown RBP9.42□□□□□ -0.9
TRAF3-209ENST00000560463 CABYRO75952 493 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 LDHAP00338 332 aaKnown RBP9.42□□□□□ -0.9
TRAF3-209ENST00000560463 INHAP05111 366 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 PTMAP06454 111 aaKnown RBP9.42□□□□□ -0.9
TRAF3-209ENST00000560463 SRGAP2CP0DJJ0 459 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 PBX1P40424 430 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 PHKA2P46019 1235 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 CLCN3P51790 818 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 GSDMDP57764 484 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 MCCD1P59942 119 aaPredicted RBP9.42□□□□□ -0.9
TRAF3-209ENST00000560463 PTENP60484 403 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 ENPEPQ07075 957 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 DRP2Q13474 957 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 PCBP1Q15365 356 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRAF3-209ENST00000560463 MAPK6Q16659 721 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 FAM187BQ17R55 369 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 VWA3BQ502W6 1294 aa9.42□□□□□ -0.9
TRAF3-209ENST00000560463 MIIPQ5JXC2 388 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms