RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DDX17Q92841 729 aaKnown RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 MYLK2Q9H1R3 596 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 PRAMEP78395 509 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 SHROOM1Q2M3G4 852 aaPredicted RBP14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 FAM45BPQ6NSW5 357 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 DPP9Q86TI2 863 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 ASIC4Q96FT7 647 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 SPATA2Q9UM82 520 aa14.68□□□□□ -0.06
CSPG4P12-202ENST00000559989 FYNP06241 537 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 TRIM25Q14258 630 aaKnown RBP14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 WLSQ5T9L3 541 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 METTL22Q9BUU2 404 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 WWP1Q9H0M0 922 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 SP110Q9HB58 689 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 KRT84Q9NSB2 600 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 MRPL39Q9NYK5 338 aaKnown RBP14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 MLNP12872 115 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 SERPINB3P29508 390 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 MICALL2Q8IY33 904 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 CCT7Q99832 543 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 C17orf80Q9BSJ5 609 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 USP44Q9H0E7 712 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 TMEM63CQ9P1W3 806 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 APPL1Q9UKG1 709 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 PCDHB8Q9UN66 801 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 RGS5O15539 181 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 SYNCRIPO60506 623 aaKnown RBP14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 FKBP3Q00688 224 aaKnown RBP14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 ITPRIPL1Q6GPH6 555 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 PCYOX1LQ8NBM8 494 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 ARL8AQ96BM9 186 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 DCUN1D1Q96GG9 259 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 HES6Q96HZ4 224 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 SLITRK6Q9H5Y7 841 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 ABCB6Q9NP58 842 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 HPS5Q9UPZ3 1129 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 UBA6A0AVT1 1052 aaPredicted RBP14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 PPP4R3CPQ6ZMV5 832 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 KRT73Q86Y46 540 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 STAG2Q8N3U4 1231 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 KLHL25Q9H0H3 589 aa14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 ADD3Q9UEY8 706 aaKnown RBP14.67□□□□□ -0.06
CSPG4P12-202ENST00000559989 AP3B1O00203 1094 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 TRIM24O15164 1050 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 CYP19A1P11511 503 aaPredicted RBP14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 NUP93Q8N1F7 819 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 ZNF507Q8TCN5 953 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 DNALI1O14645 258 aaPredicted RBP14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 CCNA1P78396 465 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 GTF2H3Q13889 308 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 PRUNE1Q86TP1 453 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 TMC2Q8TDI7 906 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 PPIP5K1Q6PFW1 1433 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 DTNBO60941 627 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 HSPA13P48723 471 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 EXD1Q8NHP7 514 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 CDHR1Q96JP9 859 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 WDR11Q9BZH6 1224 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 SOWAHDA6NJG2 315 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 FGGP02679 453 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 FOSL2P15408 326 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 IKBIPQ70UQ0 350 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 TRIM62Q9BVG3 475 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 ZBTB40Q9NUA8 1239 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 ERAP1Q9NZ08 941 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 UBE4BO95155 1302 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 KLRF2D3W0D1 207 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 NLRP14Q86W24 1093 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 P3H2Q8IVL5 708 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 FAM45AQ8TCE6 357 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 IKBKBO14920 756 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 NDUFA10O95299 355 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 CD58P19256 250 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 EIF4A3P38919 411 aaKnown RBP14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 ALDH18A1P54886 795 aaKnown RBP14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 DCAF4L1Q3SXM0 396 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 TM6SF1Q9BZW5 370 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 EPS8L2Q9H6S3 715 aa14.66□□□□□ -0.06
CSPG4P12-202ENST00000559989 SSH2Q76I76 1423 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 SAC3D1A6NKF1 404 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 ZNF839A8K0R7 811 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 ENO1P06733 434 aaKnown RBP14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 GUCA1AP43080 201 aaPredicted RBP14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 NCF4Q15080 339 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 TOM1O60784 492 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 SLC10A5Q5PT55 438 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 ARMC3Q5W041 872 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 DCAF5Q96JK2 942 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 KIFC1Q9BW19 673 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 AP4S1Q9Y587 144 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 EIF4E1BA6NMX2 242 aaKnown RBP14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 ME3Q16798 604 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 TAS2R42Q7RTR8 314 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 LRRC39Q96DD0 335 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 SNPHO15079 494 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 CALB1P05937 261 aa14.65□□□□□ -0.06
CSPG4P12-202ENST00000559989 KRT31Q15323 416 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms