RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-211ENST00000559850 ELAC1Q9H777 363 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-211ENST00000559850 ALG13Q9NP73 1137 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-211ENST00000559850 CHST12Q9NRB3 414 aa16.47■□□□□ 0.23
RABGGTA-211ENST00000559850 TYW1Q9NV66 732 aaKnown RBP16.47■□□□□ 0.23
RABGGTA-211ENST00000559850 DACT1Q9NYF0 836 aa16.47■□□□□ 0.23
RABGGTA-211ENST00000559850 MYH11P35749 1972 aa16.47■□□□□ 0.23
RABGGTA-211ENST00000559850 A0A0U1RQF3 1178 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 B4GALT5O43286 388 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 TSPAN1O60635 241 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 HOXA11P31270 313 aaPredicted RBP16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 UBXN11Q5T124 520 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 ZNF598Q86UK7 904 aaKnown RBP16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 CDR2LQ86X02 465 aaPredicted RBP16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 MCPH1Q8NEM0 835 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 CASD1Q96PB1 797 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 KIFC3Q9BVG8 833 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 FAM105AQ9NUU6 356 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 USP20Q9Y2K6 914 aa16.46■□□□□ 0.23
RABGGTA-211ENST00000559850 STX6O43752 255 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 ERLIN2O94905 339 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 EYA4O95677 639 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 SSBP05455 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 LIG1P18858 919 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 MUTP22033 750 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 DNAJB1P25685 340 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 PBX3P40426 434 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 AMHR2Q16671 573 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 ARL6IP4Q66PJ3 421 aaKnown RBP16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 RUSC1Q9BVN2 902 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 EIF2AQ9BY44 585 aaKnown RBP16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 TMEM117Q9H0C3 514 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 CWH43Q9H720 699 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 DNM3Q9UQ16 869 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 PCDHB2Q9Y5E7 798 aa16.45■□□□□ 0.22
RABGGTA-211ENST00000559850 C5orf67F2Z3F1 127 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 MARCKSP29966 332 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 PTPAQ15257 358 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 SPECC1Q5M775 1068 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 CABP7Q86V35 215 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 IFNLR1Q8IU57 520 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 ABI1Q8IZP0 508 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 KLHL23Q8NBE8 558 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 LRRC15Q8TF66 581 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 MRPL38Q96DV4 380 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 INPP5FQ9Y2H2 1132 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 RWDD3Q9Y3V2 267 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 STK24Q9Y6E0 443 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 PRUNE2Q8WUY3 3088 aa16.44■□□□□ 0.22
RABGGTA-211ENST00000559850 TTLL13PA6NNM8 815 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 EOMESO95936 686 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 EDN1P05305 212 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 ITGB1P05556 798 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 RB1P06400 928 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 ARF4P18085 180 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 TFF2Q03403 129 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 RAD51AP2Q09MP3 1159 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 FAM43BQ6ZT52 329 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 COLGALT1Q8NBJ5 622 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 USP28Q96RU2 1077 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 PLAGL2Q9UPG8 496 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 HES2Q9Y543 173 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 TDRD15B5MCY1 1934 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-211ENST00000559850 NPHP3-ACAD11A0A0J9YXS1 232 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 HOXA2O43364 376 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 AFF1P51825 1210 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 POU5F1BQ06416 359 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 PKP1Q13835 747 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 CAMK1Q14012 370 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 PTPROQ16827 1216 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 TMEM119Q4V9L6 283 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 TCEAL5Q5H9L2 206 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 HYIQ5T013 277 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 CDCA2Q69YH5 1023 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 RINT1Q6NUQ1 792 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 AGMOQ6ZNB7 445 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 USP49Q70CQ1 688 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 DAW1Q8N136 415 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 LRRC43Q8N309 656 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 SMG8Q8ND04 991 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 DEPTORQ8TB45 409 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 SPPL3Q8TCT6 385 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 CDK5RAP3Q96JB5 506 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 CLIC6Q96NY7 704 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 TRAIPQ9BWF2 469 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 APOL6Q9BWW8 343 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 CSRNP2Q9H175 543 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 LMCD1Q9NZU5 365 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 THEGQ9P2T0 379 aa16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 TCF20Q9UGU0 1960 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-211ENST00000559850 SFI1A8K8P3 1242 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 HIP1RO75146 1068 aa16.41■□□□□ 0.22
RABGGTA-211ENST00000559850 OFD1O75665 1012 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms