RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 EEF1GP26641 437 aaKnown RBP19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 NR1I3Q14994 352 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 SLAIN1Q8ND83 568 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 TUBGCP2Q9BSJ2 902 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 MINDY3Q9H8M7 445 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 HDAC6Q9UBN7 1215 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 TMEM62Q0P6H9 643 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 ALCAMQ13740 583 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 BRDTQ58F21 947 aaPredicted RBP19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 CEP135Q66GS9 1140 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 CCSAPQ6IQ19 270 aaPredicted RBP19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 NFRKBQ6P4R8 1299 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 CEP63Q96MT8 703 aa19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 RTN4Q9NQC3 1192 aaKnown RBP19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 MAGEC2Q9UBF1 373 aaPredicted RBP19.01■□□□□ 0.63
CHRNA3-206ENST00000559658 LRRC10BA6NIK2 292 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 TREHO43280 583 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 ASGR1P07306 291 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 PRKCSHP14314 528 aaPredicted RBP19■□□□□ 0.63
CHRNA3-206ENST00000559658 CDC25BP30305 580 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 MTIF2P46199 727 aaKnown RBP19■□□□□ 0.63
CHRNA3-206ENST00000559658 ADAM17P78536 824 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 SPAG1Q07617 926 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 ARID5BQ14865 1188 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 KCNA10Q16322 511 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 CDCA2Q69YH5 1023 aaPredicted RBP19■□□□□ 0.63
CHRNA3-206ENST00000559658 TMC6Q7Z403 805 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 CCDC155Q8N6L0 562 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 KLHDC9Q8NEP7 349 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 TCP11Q8WWU5 503 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 CCDC113Q9H0I3 377 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 FAM49AQ9H0Q0 323 aaPredicted RBP19■□□□□ 0.63
CHRNA3-206ENST00000559658 DMAC2Q9NW81 257 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 AKT3Q9Y243 479 aa19■□□□□ 0.63
CHRNA3-206ENST00000559658 N4BP3O15049 544 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 GAS2O43903 313 aaKnown RBP18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 IQCF3P0C7M6 154 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 NKX3-2P78367 333 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 PPP2R5AQ15172 486 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 CCDC40Q4G0X9 1142 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 LHX8Q68G74 356 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 HS2ST1Q7LGA3 356 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 VSTM4Q8IW00 320 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 DRC7Q8IY82 874 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 KIAA0319LQ8IZA0 1049 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 RETREG2Q8NC44 543 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 HAPLN2Q9GZV7 340 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 TMEM206Q9H813 350 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 MBLAC1A4D2B0 266 aaPredicted RBP18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 HNRNPDLO14979 420 aaKnown RBP18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 CETN3O15182 167 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 PBX1P40424 430 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 GOLGA8FQ08AF8 430 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 GOLGA8DPQ0D2H9 430 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 FILIP1Q7Z7B0 1213 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 FAM114A1Q8IWE2 563 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 HVCN1Q96D96 273 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 SAAL1Q96ER3 474 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 ZBTB45Q96K62 511 aaPredicted RBP18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 MTG1Q9BT17 334 aaPredicted RBP18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 IFT122Q9HBG6 1241 aa18.99■□□□□ 0.63
CHRNA3-206ENST00000559658 PHLPP2Q6ZVD8 1323 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 NRCAMQ92823 1304 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 A0A087WZ62 844 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 GOLGA8IPA6NC78 632 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 GOLGA8JA6NMD2 632 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 LGALS16A8MUM7 142 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 PES1O00541 588 aaKnown RBP18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 MAGEB2O15479 319 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 B4GALT5O43286 388 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 HOXC8P31273 242 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 KLK7P49862 253 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 MXD4Q14582 209 aaPredicted RBP18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 NFIL3Q16649 462 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 NBPF20Q3BBV1 942 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 RDH13Q8NBN7 331 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 SLC17A8Q8NDX2 589 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 BICD1Q96G01 975 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 JPH2Q9BR39 696 aaPredicted RBP18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 FDXACB1Q9BRP7 624 aaPredicted RBP18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 NOC4LQ9BVI4 516 aaKnown RBP18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 TARS2Q9BW92 718 aaKnown RBP18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 HSPBP1Q9NZL4 362 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 PTPN22Q9Y2R2 807 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 GRIN2DO15399 1336 aa18.98■□□□□ 0.63
CHRNA3-206ENST00000559658 K7ERI5 159 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 CBFA2T2O43439 604 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 MTFR1Q15390 333 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 ARMCX5Q6P1M9 558 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 TRIM59Q8IWR1 403 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 BORCS6Q96GS4 357 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 ZNF830Q96NB3 372 aaPredicted RBP18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 CTAGE1Q96RT6 745 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 KATNAL1Q9BW62 490 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 UNC93B1Q9H1C4 597 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 SPC25Q9HBM1 224 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 MSCO60682 206 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 ADRB2P07550 413 aa18.97■□□□□ 0.63
CHRNA3-206ENST00000559658 CYP2C9P11712 490 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms