RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 RHOVQ96L33 236 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CARS2Q9HA77 564 aaKnown RBP7.97□□□□□ -1.13
ZEB1-216ENST00000559496 TCP11L1Q9NUJ3 509 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 SPTLC3Q9NUV7 552 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 GPRC5DQ9NZD1 345 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CNTNAP1P78357 1384 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 NID2Q14112 1375 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 PLIN4Q96Q06 1357 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CDKL5O76039 1030 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 DDAH1O94760 285 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CTDNEP1O95476 244 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 C8AP07357 584 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CALM1P0DP23 149 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CALM2P0DP24 149 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CALM3P0DP25 149 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 AKR1B1P15121 316 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 PDCP20941 246 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 SHMT1P34896 483 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 SSR1P43307 286 aaKnown RBP7.97□□□□□ -1.13
ZEB1-216ENST00000559496 TNNI2P48788 182 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 YARSP54577 528 aaKnown RBP7.97□□□□□ -1.13
ZEB1-216ENST00000559496 TNK2Q07912 1038 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 TNFAIP1Q13829 316 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 PKP1Q13835 747 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 RPAINQ86UA6 219 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 FAM83AQ86UY5 434 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 DGKHQ86XP1 1220 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 FOXP4Q8IVH2 680 aaPredicted RBP7.97□□□□□ -1.13
ZEB1-216ENST00000559496 KRT222Q8N1A0 295 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 FAM184AQ8NB25 1140 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 SMARCC2Q8TAQ2 1214 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 ANKS1AQ92625 1134 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CCDC17Q96LX7 622 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 DNAJC18Q9H819 358 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 KAT14Q9H8E8 782 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 MED4Q9NPJ6 270 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 IL17RBQ9NRM6 502 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 CTNND2Q9UQB3 1225 aa7.97□□□□□ -1.13
ZEB1-216ENST00000559496 WDR33Q9C0J8 1336 aaKnown RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 CCDC196A0A1B0GTZ2 297 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 UPK3BL1B0FP48 263 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 UPK3BL2E5RIL1 263 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 MPHOSPH10O00566 681 aaKnown RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 STX6O43752 255 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 GRIN3BO60391 1043 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 DDNO94850 711 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 SYT1P21579 422 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 U2AF2P26368 475 aaKnown RBP eCLIP7.96□□□□□ -1.147e-7■■■■■ 29.9
ZEB1-216ENST00000559496 AFMP43652 599 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 ZKSCAN8Q15776 578 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 CERKLQ49MI3 558 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 CT47A1Q5JQC4 288 aaPredicted RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 LARP1BQ659C4 914 aaKnown RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 RCSD1Q6JBY9 416 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 FAM13CQ8NE31 585 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 TNPO1Q92973 898 aaKnown RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 CEP95Q96GE4 821 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 TMEM39BQ9GZU3 492 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 RSPH14Q9UHP6 348 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 HERC5Q9UII4 1024 aaKnown RBP7.96□□□□□ -1.14
ZEB1-216ENST00000559496 STX8Q9UNK0 236 aa7.96□□□□□ -1.14
ZEB1-216ENST00000559496 ASTN2O75129 1339 aaPredicted RBP7.95□□□□□ -1.14
ZEB1-216ENST00000559496 IGKV6D-41A0A0C4DH26 115 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 VPS37CA5D8V6 355 aaPredicted RBP7.95□□□□□ -1.14
ZEB1-216ENST00000559496 TOP1P11387 765 aaKnown RBP7.95□□□□□ -1.14
ZEB1-216ENST00000559496 CASQ1P31415 396 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 EPS15P42566 896 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 TROAPQ12815 778 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 RASA3Q14644 834 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 PPP2R5BQ15173 497 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 TATDN1Q6P1N9 297 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 METTL16Q86W50 562 aaKnown RBP7.95□□□□□ -1.14
ZEB1-216ENST00000559496 FANCBQ8NB91 859 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 GOLM1Q8NBJ4 401 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 CTCFLQ8NI51 663 aaPredicted RBP7.95□□□□□ -1.14
ZEB1-216ENST00000559496 PPP1R13LQ8WUF5 828 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 CYB5D2Q8WUJ1 264 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 TMEM47Q9BQJ4 181 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 FAM53CQ9NYF3 392 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 ORC3Q9UBD5 711 aaPredicted RBP7.95□□□□□ -1.14
ZEB1-216ENST00000559496 HACL1Q9UJ83 578 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 ZDHHC9Q9Y397 364 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 SH3BP1Q9Y3L3 701 aa7.95□□□□□ -1.14
ZEB1-216ENST00000559496 GREB1LQ9C091 1923 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-216ENST00000559496 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 H3BQV1 296 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 TTLL1O95922 423 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 ZSCAN22P10073 491 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-216ENST00000559496 IFNAR1P17181 557 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 KIF5BP33176 963 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 CYP2C19P33261 490 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 NOVP48745 357 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 JAG1P78504 1218 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 FAM160A1Q05DH4 1040 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 SSRP1Q08945 709 aaKnown RBP7.94□□□□□ -1.14
ZEB1-216ENST00000559496 MPP2Q14168 576 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 NOLC1Q14978 699 aaKnown RBP eCLIP7.94□□□□□ -1.14
ZEB1-216ENST00000559496 NTRK3Q16288 839 aa7.94□□□□□ -1.14
ZEB1-216ENST00000559496 ABCB5Q2M3G0 1257 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms