RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 MINDY3Q9H8M7 445 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 ALG13Q9NP73 1137 aaKnown RBP14□□□□□ -0.17
LRRC28-214ENST00000559433 AGPAT5Q9NUQ2 364 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 RNF19AQ9NV58 838 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 TYW1Q9NV66 732 aaKnown RBP14□□□□□ -0.17
LRRC28-214ENST00000559433 HCSTQ9UBK5 93 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 DBR1Q9UK59 544 aaKnown RBP14□□□□□ -0.17
LRRC28-214ENST00000559433 PLAGL2Q9UPG8 496 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 ARHGEF35A5YM69 484 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 LAD1O00515 517 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 ERLIN2O94905 339 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 ITGB1P05556 798 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 BMP1P13497 986 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 ATF7P17544 494 aaPredicted RBP13.99□□□□□ -0.17
LRRC28-214ENST00000559433 LAG3P18627 525 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 KCNA5P22460 613 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 CCT6AP40227 531 aaKnown RBP13.99□□□□□ -0.17
LRRC28-214ENST00000559433 RAB27AP51159 221 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 KCNQ1P51787 676 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 CAPSQ13938 189 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 TCEAL5Q5H9L2 206 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 CLLU1OSQ5K130 101 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
LRRC28-214ENST00000559433 MAEAQ7L5Y9 396 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 ZNF598Q86UK7 904 aaKnown RBP13.99□□□□□ -0.17
LRRC28-214ENST00000559433 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 HELQQ8TDG4 1101 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 CASD1Q96PB1 797 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 IGFLR1Q9H665 355 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 CWH43Q9H720 699 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.99□□□□□ -0.17
LRRC28-214ENST00000559433 FAM105AQ9NUU6 356 aa13.99□□□□□ -0.17
LRRC28-214ENST00000559433 PUF60Q9UHX1 559 aaKnown RBP13.99□□□□□ -0.17
LRRC28-214ENST00000559433 TTC28Q96AY4 2481 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 MUTP22033 750 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 GLRA2P23416 452 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 ARL2P36404 184 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 PRPHP41219 470 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 PTENP60484 403 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 CUL4AQ13619 759 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 PDIA5Q14554 519 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 PUS10Q3MIT2 529 aaKnown RBP13.98□□□□□ -0.17
LRRC28-214ENST00000559433 LONRF3Q496Y0 759 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 DTHD1Q6ZMT9 781 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 THNSL1Q8IYQ7 743 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 IGSF22Q8N9C0 903 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 MCPH1Q8NEM0 835 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 SNX29Q8TEQ0 813 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 TRAIPQ9BWF2 469 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 FAM50BQ9Y247 325 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 GTF3C3Q9Y5Q9 886 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
LRRC28-214ENST00000559433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.97□□□□□ -0.17
LRRC28-214ENST00000559433 INO80B-WBP1J3KQ70 363 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 DNAJB1P25685 340 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
LRRC28-214ENST00000559433 KRT17Q04695 432 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 PADI6Q6TGC4 694 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 LRRC55Q6ZSA7 311 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 SPPL3Q8TCT6 385 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 POF1BQ8WVV4 589 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 LPPQ93052 612 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 ZNF558Q96NG5 402 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 MRPL9Q9BYD2 267 aaKnown RBP13.97□□□□□ -0.17
LRRC28-214ENST00000559433 GPRC5CQ9NQ84 441 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 CLDND1Q9NY35 253 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 KIAA1024Q9UPX6 916 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 PCDHB2Q9Y5E7 798 aa13.97□□□□□ -0.17
LRRC28-214ENST00000559433 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.17
LRRC28-214ENST00000559433 LRRIQ4A6NIV6 560 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 PP2D1A8MPX8 630 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 TSPAN1O60635 241 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 FGF18O76093 207 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 HOXA11P31270 313 aaPredicted RBP13.96□□□□□ -0.17
LRRC28-214ENST00000559433 UBE3AQ05086 875 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 MBTD1Q05BQ5 628 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 POU5F1BQ06416 359 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 CAMK1Q14012 370 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
LRRC28-214ENST00000559433 PCBP1Q15365 356 aaKnown RBP eCLIP13.96□□□□□ -0.17
LRRC28-214ENST00000559433 IL17AQ16552 155 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 ECM1Q16610 540 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 LEXMQ3ZCV2 418 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 KRT79Q5XKE5 535 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 GLB1LQ6UWU2 654 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 PGBD4Q96DM1 585 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 PABPC5Q96DU9 382 aaKnown RBP13.96□□□□□ -0.17
LRRC28-214ENST00000559433 NFKBIZQ9BYH8 718 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 BHMT2Q9H2M3 363 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 DDX19AQ9NUU7 478 aaKnown RBP13.96□□□□□ -0.17
LRRC28-214ENST00000559433 INPP5FQ9Y2H2 1132 aa13.96□□□□□ -0.17
LRRC28-214ENST00000559433 TDRD15B5MCY1 1934 aaKnown RBP13.96□□□□□ -0.18
LRRC28-214ENST00000559433 MYH11P35749 1972 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 MEIS3P2A8K0S8 358 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 ZNF623O75123 536 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 CYP11B2P19099 503 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 AXLP30530 894 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 IRS1P35568 1242 aa13.95□□□□□ -0.18
LRRC28-214ENST00000559433 PPM1AP35813 382 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms