RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 APBB1IPQ7Z5R6 666 aaPredicted RBP10.75□□□□□ -0.69
SPG11-214ENST00000558989 CATSPER3Q86XQ3 398 aa10.75□□□□□ -0.69
SPG11-214ENST00000558989 HSD17B14Q9BPX1 270 aa10.75□□□□□ -0.69
SPG11-214ENST00000558989 LRWD1Q9UFC0 647 aa10.75□□□□□ -0.69
SPG11-214ENST00000558989 CHD9Q3L8U1 2897 aa10.75□□□□□ -0.69
SPG11-214ENST00000558989 RALGAPA2Q2PPJ7 1873 aa10.75□□□□□ -0.69
SPG11-214ENST00000558989 CHD7Q9P2D1 2997 aa10.75□□□□□ -0.69
SPG11-214ENST00000558989 GPR182O15218 404 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 PEX14O75381 377 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 SPATA31C1P0DKV0 1188 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 CCT6AP40227 531 aaKnown RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 TRAPPC10P48553 1259 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 C4orf32Q8N8J7 132 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 USP38Q8NB14 1042 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 ERMNQ8TAM6 284 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 PLIN2Q99541 437 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 MTRQ99707 1265 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 FTHL17Q9BXU8 183 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 ATG2AQ2TAZ0 1938 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 IGKV6-21A0A0C4DH24 114 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 HSP90AA1P07900 732 aaKnown RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 DARSP14868 501 aaKnown RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 ZSCAN20P17040 1043 aaPredicted RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 EIF4BP23588 611 aaKnown RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 BTG3Q14201 252 aaPredicted RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 IL17AQ16552 155 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 ECM1Q16610 540 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 FAM173BQ6P4H8 233 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 HSCBQ8IWL3 235 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 ZNF710Q8N1W2 664 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 SNX29Q8TEQ0 813 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 PRPF31Q8WWY3 499 aaKnown RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 TGS1Q96RS0 853 aaKnown RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 GCOM2Q9BZD3 368 aaPredicted RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 PRDM6Q9NQX0 595 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 FARP1Q9Y4F1 1045 aaPredicted RBP10.74□□□□□ -0.69
SPG11-214ENST00000558989 PCDHB7Q9Y5E2 793 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 COL4A3BPQ9Y5P4 624 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 SQORQ9Y6N5 450 aa10.74□□□□□ -0.69
SPG11-214ENST00000558989 TCF20Q9UGU0 1960 aaKnown RBP10.73□□□□□ -0.69
SPG11-214ENST00000558989 BRWD1Q9NSI6 2320 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 VWA3AA6NCI4 1184 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 RARRES1P49788 294 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 HTRA4P83105 476 aaPredicted RBP10.73□□□□□ -0.69
SPG11-214ENST00000558989 CEBPZQ03701 1054 aaKnown RBP10.73□□□□□ -0.69
SPG11-214ENST00000558989 GRB10Q13322 594 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 RILPL1Q5EBL4 403 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 FAM102BQ5T8I3 360 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 DTHD1Q6ZMT9 781 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 CATSPER4Q7RTX7 472 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 FIBCD1Q8N539 461 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 RNF149Q8NC42 400 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 SLC17A8Q8NDX2 589 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 NEK9Q8TD19 979 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
SPG11-214ENST00000558989 JPH2Q9BR39 696 aaPredicted RBP10.73□□□□□ -0.69
SPG11-214ENST00000558989 TSPYL2Q9H2G4 693 aaPredicted RBP10.73□□□□□ -0.69
SPG11-214ENST00000558989 DHX33Q9H6R0 707 aaKnown RBP10.73□□□□□ -0.69
SPG11-214ENST00000558989 ATP6V0A4Q9HBG4 840 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 GPRC5CQ9NQ84 441 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 XPNPEP1Q9NQW7 623 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 ZMIZ1Q9ULJ6 1067 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 KIAA1024Q9UPX6 916 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 PLXNA4Q9HCM2 1894 aa10.73□□□□□ -0.69
SPG11-214ENST00000558989 SCAMP3O14828 347 aaKnown RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 FGFR1P11362 822 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 LIG1P18858 919 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 SYT1P21579 422 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 CTNNB1P35222 781 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 LAMTOR4Q0VGL1 99 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 ORC2Q13416 577 aaPredicted RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 ODR4Q5SWX8 454 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 SPOUT1Q5T280 376 aaKnown RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 ASAP3Q8TDY4 903 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 POLR3FQ9H1D9 316 aaPredicted RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 TUFT1Q9NNX1 390 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 HCSTQ9UBK5 93 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 PIN4Q9Y237 131 aaKnown RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 FAN1Q9Y2M0 1017 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 ARHGEF35A5YM69 484 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 E9PMD0 336 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 DGKIO75912 1065 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 STAG3L1P0CL83 205 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 SARSP49591 514 aaKnown RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 FXR2P51116 673 aaKnown RBP eCLIP10.72□□□□□ -0.69
SPG11-214ENST00000558989 DSG2Q14126 1118 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 FOXD4L6Q3SYB3 417 aaPredicted RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 HAUS3Q68CZ6 603 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 FOXD4L3Q6VB84 417 aaPredicted RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 SPDYE1Q8NFV5 336 aaPredicted RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 TCP11Q8WWU5 503 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 NACC1Q96RE7 527 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 POLR3CQ9BUI4 534 aaPredicted RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 MINDY3Q9H8M7 445 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 RGS18Q9NS28 235 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 ANKEF1Q9NU02 776 aa10.72□□□□□ -0.69
SPG11-214ENST00000558989 DDX19AQ9NUU7 478 aaKnown RBP10.72□□□□□ -0.69
SPG11-214ENST00000558989 ADGRA3Q8IWK6 1321 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms