RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 TDP2O95551 362 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPL28-206ENST00000558752 MCM2P49736 904 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 GPC3P51654 580 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 PRKCEQ02156 737 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 PIK3AP1Q6ZUJ8 805 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 SLC39A11Q8N1S5 342 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 LINC01465Q8N7H1 131 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 ATOH1Q92858 354 aaPredicted RBP17.1■□□□□ 0.33
RPL28-206ENST00000558752 ASIC4Q96FT7 647 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 APOL5Q9BWW9 433 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 ZDBF2Q9HCK1 2354 aa17.1■□□□□ 0.33
RPL28-206ENST00000558752 C2orf71A6NGG8 1288 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 MARCH6O60337 910 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 CCNT1O60563 726 aaKnown RBP17.09■□□□□ 0.33
RPL28-206ENST00000558752 JAK2O60674 1132 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 DKC1O60832 514 aaKnown RBP eCLIP17.09■□□□□ 0.33
RPL28-206ENST00000558752 CXCL14O95715 111 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 ATAT1Q5SQI0 421 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 MIER3Q7Z3K6 550 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 SLFN12Q8IYM2 578 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 PLCD3Q8N3E9 789 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 HELQQ8TDG4 1101 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 OXER1Q8TDS5 423 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
RPL28-206ENST00000558752 UNC45AQ9H3U1 944 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 KCNMB3Q9NPA1 279 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 GJB4Q9NTQ9 266 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 HCFC2Q9Y5Z7 792 aa17.09■□□□□ 0.33
RPL28-206ENST00000558752 RAB27AP51159 221 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 POLGP54098 1239 aaPredicted RBP17.08■□□□□ 0.32
RPL28-206ENST00000558752 PPP2R5CQ13362 524 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 XKR3Q5GH77 459 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 CLLU1OSQ5K130 101 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 DIS3L2Q8IYB7 885 aaKnown RBP17.08■□□□□ 0.32
RPL28-206ENST00000558752 KREMEN2Q8NCW0 462 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 TNFRSF25Q93038 417 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 TRAIPQ9BWF2 469 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 KIF3AQ9Y496 699 aa17.08■□□□□ 0.32
RPL28-206ENST00000558752 BTBD18B2RXH4 712 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 CHMP2AO43633 222 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 CLASP2O75122 1294 aaKnown RBP17.07■□□□□ 0.32
RPL28-206ENST00000558752 VCPP55072 806 aaKnown RBP17.07■□□□□ 0.32
RPL28-206ENST00000558752 BCAR1P56945 870 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 NR5A1Q13285 461 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
RPL28-206ENST00000558752 GLB1LQ6UWU2 654 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 ZNF598Q86UK7 904 aaKnown RBP17.07■□□□□ 0.32
RPL28-206ENST00000558752 ZNF410Q86VK4 478 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 EXOC8Q8IYI6 725 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 VPS52Q8N1B4 723 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 FAM184AQ8NB25 1140 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 C8orf76Q96K31 380 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
RPL28-206ENST00000558752 SEPT9Q9UHD8 586 aaPredicted RBP17.07■□□□□ 0.32
RPL28-206ENST00000558752 IRAK3Q9Y616 596 aa17.07■□□□□ 0.32
RPL28-206ENST00000558752 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 SLC37A4O43826 429 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 ZNF862O60290 1169 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 GFRA3O60609 400 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 SP100P23497 879 aaPredicted RBP17.06■□□□□ 0.32
RPL28-206ENST00000558752 PBX3P40426 434 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 PHKA2P46019 1235 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 RNASELQ05823 741 aaKnown RBP17.06■□□□□ 0.32
RPL28-206ENST00000558752 ST3GAL1Q11201 340 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 DDX53Q86TM3 631 aaKnown RBP17.06■□□□□ 0.32
RPL28-206ENST00000558752 TDRD5Q8NAT2 981 aaKnown RBP17.06■□□□□ 0.32
RPL28-206ENST00000558752 FBXO18Q8NFZ0 1043 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 PGBD4Q96DM1 585 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 FOXP1Q9H334 677 aaPredicted RBP17.06■□□□□ 0.32
RPL28-206ENST00000558752 DBR1Q9UK59 544 aaKnown RBP17.06■□□□□ 0.32
RPL28-206ENST00000558752 USTQ9Y2C2 406 aa17.06■□□□□ 0.32
RPL28-206ENST00000558752 ZFHX2Q9C0A1 2572 aaPredicted RBP17.06■□□□□ 0.32
RPL28-206ENST00000558752 CFAP54Q96N23 3096 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.05■□□□□ 0.32
RPL28-206ENST00000558752 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
RPL28-206ENST00000558752 P4HBP07237 508 aaKnown RBP17.05■□□□□ 0.32
RPL28-206ENST00000558752 PSMC5P62195 406 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 EPHA7Q15375 998 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 TARBP2Q15633 366 aaKnown RBP17.05■□□□□ 0.32
RPL28-206ENST00000558752 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 ZDHHC14Q8IZN3 488 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 URGCPQ8TCY9 931 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 ACSF2Q96CM8 615 aaPredicted RBP17.05■□□□□ 0.32
RPL28-206ENST00000558752 ZNF668Q96K58 619 aaPredicted RBP17.05■□□□□ 0.32
RPL28-206ENST00000558752 MFSD1Q9H3U5 465 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 POMKQ9H5K3 350 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 PPME1Q9Y570 386 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 KMT2EQ8IZD2 1858 aa17.05■□□□□ 0.32
RPL28-206ENST00000558752 C2CD4DB7Z1M9 353 aa17.04■□□□□ 0.32
RPL28-206ENST00000558752 NT5C1B-RDH14C9J2C7 533 aa17.04■□□□□ 0.32
RPL28-206ENST00000558752 GALR2O43603 387 aaPredicted RBP17.04■□□□□ 0.32
RPL28-206ENST00000558752 CTSAP10619 480 aa17.04■□□□□ 0.32
RPL28-206ENST00000558752 QARSP47897 775 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms