RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 NEDD9Q14511 834 aa11.77□□□□□ -0.53
CSPG4P5-201ENST00000558731 ZC3H15Q8WU90 426 aaKnown RBP11.77□□□□□ -0.53
CSPG4P5-201ENST00000558731 ERO1AQ96HE7 468 aa11.77□□□□□ -0.53
CSPG4P5-201ENST00000558731 ST7Q9NRC1 585 aa11.77□□□□□ -0.53
CSPG4P5-201ENST00000558731 KCND2Q9NZV8 630 aa11.77□□□□□ -0.53
CSPG4P5-201ENST00000558731 DDX41Q9UJV9 622 aaKnown RBP11.77□□□□□ -0.53
CSPG4P5-201ENST00000558731 INO80B-WBP1J3KQ70 363 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 ARIH2O95376 493 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 OATP04181 439 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 MXI1P50539 228 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 VAMP7P51809 220 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 BFSP1Q12934 665 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 XRRA1Q6P2D8 792 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 GPRC5AQ8NFJ5 357 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 DNERQ8NFT8 737 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 GOLGA5Q8TBA6 731 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 INO80BQ9C086 356 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 TTYH3Q9C0H2 523 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 GOLPH3Q9H4A6 298 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 NRBP2Q9NSY0 501 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 TBX20Q9UMR3 447 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 ADAMTS5Q9UNA0 930 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 ATAD5Q96QE3 1844 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 CCNA1P78396 465 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 TERF2Q15554 542 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 FAM160B1Q5W0V3 765 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 B3GNT9Q6UX72 402 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 VPS36Q86VN1 386 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 MCPH1Q8NEM0 835 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 IWS1Q96ST2 819 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 LUC7LQ9NQ29 371 aaKnown RBP11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 ANKEF1Q9NU02 776 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 DBR1Q9UK59 544 aaKnown RBP11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 ZMYM2Q9UBW7 1377 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 BTBD19C9JJ37 291 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 PHACTR2O75167 634 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 TACC1O75410 805 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 KRT5P13647 590 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 CCDC181Q5TID7 509 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 SEPT1Q8WYJ6 367 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
CSPG4P5-201ENST00000558731 NCK2O43639 380 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 SLC25A27O95847 323 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 ADORA2AP29274 412 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 STAT1P42224 750 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 DRP2Q13474 957 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 DRAP1Q14919 205 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 SNRNP35Q16560 246 aaKnown RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 KIFAP3Q92845 792 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 ZBTB45Q96K62 511 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 TARS2Q9BW92 718 aaKnown RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 PACSIN1Q9BY11 444 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 CTIFO43310 598 aaKnown RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 NOL4O94818 638 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 FTCDO95954 541 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 ATP1A1P05023 1023 aaKnown RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 ZNF157P51786 506 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 KLHDC7AQ5VTJ3 777 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 ABHD15Q6UXT9 468 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 BAP1Q92560 729 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 ALS2CR12Q96Q35 445 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 FIZ1Q96SL8 496 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 INTS2Q9H0H0 1204 aaKnown RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 CHORDC1Q9UHD1 332 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 BRCA1P38398 1863 aaKnown RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 MYPNQ86TC9 1320 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 A0A087X0T9 212 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 ZNF263O14978 683 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 SERPING1P05155 500 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 FAM228BP0C875 321 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 HOXA7P31268 230 aaPredicted RBP11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 VAV2P52735 878 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 PTK2Q05397 1052 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 IQCEQ6IPM2 695 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 CCDC170Q8IYT3 715 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 RNF149Q8NC42 400 aa11.75□□□□□ -0.53
CSPG4P5-201ENST00000558731 TMEM110-MUSTN1A8MSY1 372 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 ATP2A1O14983 1001 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 FARP2O94887 1054 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 CETPP11597 493 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 ARHGAP25P42331 645 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 ZNF131P52739 623 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 ACP6Q9NPH0 428 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 XPNPEP1Q9NQW7 623 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 AJAP1Q9UKB5 411 aaPredicted RBP11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 ADGRA3Q8IWK6 1321 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 EIF3CLB5ME19 914 aaKnown RBP11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 ZNF185O15231 689 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 ZNF286BP0CG31 522 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 MUTP22033 750 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 CLCN3P51790 818 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 PHLDB2Q86SQ0 1253 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 GLYCTKQ8IVS8 523 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 SAMD3Q8N6K7 520 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 TMEM161BQ8NDZ6 487 aa11.74□□□□□ -0.53
CSPG4P5-201ENST00000558731 KAT5Q92993 513 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms