RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 C4orf32Q8N8J7 132 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 RNF149Q8NC42 400 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.26■□□□□ 0.35
CSHL1-208ENST00000558609 PIGOQ8TEQ8 1089 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 POLR3CQ9BUI4 534 aaPredicted RBP17.26■□□□□ 0.35
CSHL1-208ENST00000558609 MINDY3Q9H8M7 445 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 AGPAT5Q9NUQ2 364 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 FAM105AQ9NUU6 356 aa17.26■□□□□ 0.35
CSHL1-208ENST00000558609 MED24O75448 989 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 CD2BP2O95400 341 aaKnown RBP17.25■□□□□ 0.35
CSHL1-208ENST00000558609 HOXA11P31270 313 aaPredicted RBP17.25■□□□□ 0.35
CSHL1-208ENST00000558609 IRS1P35568 1242 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 ARL2P36404 184 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 TOB1P50616 345 aaPredicted RBP17.25■□□□□ 0.35
CSHL1-208ENST00000558609 RAB27AP51159 221 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 PTENP60484 403 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 PLCB3Q01970 1234 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 PCBP1Q15365 356 aaKnown RBP eCLIP17.25■□□□□ 0.35
CSHL1-208ENST00000558609 PUS10Q3MIT2 529 aaKnown RBP17.25■□□□□ 0.35
CSHL1-208ENST00000558609 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 PPP2R3CQ969Q6 453 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 CCDC43Q96MW1 224 aaKnown RBP17.25■□□□□ 0.35
CSHL1-208ENST00000558609 NACC1Q96RE7 527 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 CLDND1Q9NY35 253 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
CSHL1-208ENST00000558609 LZTS1Q9Y250 596 aa17.25■□□□□ 0.35
CSHL1-208ENST00000558609 ARIH1Q9Y4X5 557 aaPredicted RBP17.25■□□□□ 0.35
CSHL1-208ENST00000558609 PLXNA4Q9HCM2 1894 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 A0A087WWV3 80 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 RPA1P27694 616 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 LTBRP36941 435 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
CSHL1-208ENST00000558609 TFDP1Q14186 410 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 IFNLR1Q8IU57 520 aaPredicted RBP17.24■□□□□ 0.35
CSHL1-208ENST00000558609 ERMNQ8TAM6 284 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 HELQQ8TDG4 1101 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 ZNF558Q96NG5 402 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
CSHL1-208ENST00000558609 CD320Q9NPF0 282 aa17.24■□□□□ 0.35
CSHL1-208ENST00000558609 GRXCR2A6NFK2 248 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 H3BQ06 376 aaPredicted RBP17.23■□□□□ 0.35
CSHL1-208ENST00000558609 CSPG5O95196 566 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 MUTP22033 750 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 GTF2F1P35269 517 aaKnown RBP eCLIP17.23■□□□□ 0.35
CSHL1-208ENST00000558609 PPM1AP35813 382 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 ADAM15Q13444 863 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 NBR1Q14596 966 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 TMEM31Q5JXX7 168 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 PTCRAQ6ISU1 281 aaPredicted RBP17.23■□□□□ 0.35
CSHL1-208ENST00000558609 PDE12Q6L8Q7 609 aaKnown RBP17.23■□□□□ 0.35
CSHL1-208ENST00000558609 EP400NLQ6ZTU2 488 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 ASAP3Q8TDY4 903 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
CSHL1-208ENST00000558609 NFKBIZQ9BYH8 718 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 TLR9Q9NR96 1032 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 PCDHB2Q9Y5E7 798 aa17.23■□□□□ 0.35
CSHL1-208ENST00000558609 FSCN2O14926 492 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 GLRA2P23416 452 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 ERVFC1P60507 584 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 PTGDRQ13258 359 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 CAPSQ13938 189 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 PDIA5Q14554 519 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 UBXN11Q5T124 520 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 GLB1LQ6UWU2 654 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
CSHL1-208ENST00000558609 ADGRD2Q7Z7M1 963 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 MICAL1Q8TDZ2 1067 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 LPPQ93052 612 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 PGBD4Q96DM1 585 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 IGFLR1Q9H665 355 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 SPG21Q9NZD8 308 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 PUF60Q9UHX1 559 aaKnown RBP17.22■□□□□ 0.35
CSHL1-208ENST00000558609 PCDHB6Q9Y5E3 794 aa17.22■□□□□ 0.35
CSHL1-208ENST00000558609 FAM86C2PA6NEL3 165 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 MEIS3P2A8K0S8 358 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 LAD1O00515 517 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 USO1O60763 962 aaKnown RBP17.21■□□□□ 0.35
CSHL1-208ENST00000558609 OFD1O75665 1012 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 ERLIN2O94905 339 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 GJB2P29033 226 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 AXLP30530 894 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 KRT17Q04695 432 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 NOMO2Q5JPE7 1267 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 HAUS3Q68CZ6 603 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 POTEGQ6S5H5 508 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 SLC39A11Q8N1S5 342 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 EFHBQ8N7U6 833 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 MCPH1Q8NEM0 835 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 POLR3FQ9H1D9 316 aaPredicted RBP17.21■□□□□ 0.35
CSHL1-208ENST00000558609 HCN4Q9Y3Q4 1203 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 PCDHGC5Q9Y5F6 944 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 STK24Q9Y6E0 443 aa17.21■□□□□ 0.35
CSHL1-208ENST00000558609 CARNS1A5YM72 827 aa17.2■□□□□ 0.34
CSHL1-208ENST00000558609 INO80B-WBP1J3KQ70 363 aa17.2■□□□□ 0.34
CSHL1-208ENST00000558609 LINC01565O15544 149 aa17.2■□□□□ 0.34
CSHL1-208ENST00000558609 TSPAN1O60635 241 aa17.2■□□□□ 0.34
CSHL1-208ENST00000558609 GPR37L1O60883 481 aa17.2■□□□□ 0.34
CSHL1-208ENST00000558609 IL9P15248 144 aa17.2■□□□□ 0.34
CSHL1-208ENST00000558609 PBX3P40426 434 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms