RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 HELBQ8NG08 1087 aaPredicted RBP12.07□□□□□ -0.48
PCAT29-201ENST00000558411 NCSTNQ92542 709 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 DDX23Q9BUQ8 820 aaKnown RBP12.07□□□□□ -0.48
PCAT29-201ENST00000558411 SPZ1Q9BXG8 430 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 TBC1D10AQ9BXI6 508 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 RAB34Q9BZG1 259 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 NMRK1Q9NWW6 199 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 ARMCX3Q9UH62 379 aaPredicted RBP12.07□□□□□ -0.48
PCAT29-201ENST00000558411 ACTL7BQ9Y614 415 aa12.07□□□□□ -0.48
PCAT29-201ENST00000558411 PFASO15067 1338 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 MAGEB2O15479 319 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 NMT2O60551 498 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 VCAM1P19320 739 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 CTNNA2P26232 953 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 JAM2P57087 298 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 GSTA3Q16772 222 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 TMEM266Q2M3C6 531 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 TMEM119Q4V9L6 283 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 FAM26FQ5R3K3 315 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 FOXB2Q5VYV0 432 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
PCAT29-201ENST00000558411 LRRC8CQ8TDW0 803 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 OPTNQ96CV9 577 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 NLRP3Q96P20 1036 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 LRRC37BQ96QE4 947 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 PPP1R9AQ9ULJ8 1098 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
PCAT29-201ENST00000558411 ADGRA3Q8IWK6 1321 aa12.06□□□□□ -0.48
PCAT29-201ENST00000558411 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 DDX3XO00571 662 aaKnown RBP eCLIP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 TAC1P20366 129 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 GALCP54803 685 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 PRPF4BQ13523 1007 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 KPNB1Q14974 876 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 PABPC1LQ4VXU2 614 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 HHATQ5VTY9 493 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 FRMD5Q7Z6J6 570 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 GLIS3Q8NEA6 775 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 RBM46Q8TBY0 533 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 SLC7A6OSQ96CW6 309 aaPredicted RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 ERP27Q96DN0 273 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 MTMR9Q96QG7 549 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 LZTS2Q9BRK4 669 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 PITPNM3Q9BZ71 974 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 KCNK9Q9NPC2 374 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 NKIRAS1Q9NYS0 192 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 LARSQ9P2J5 1176 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 ATXN10Q9UBB4 475 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 LNPEPQ9UIQ6 1025 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 TMCO1Q9UM00 188 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 C10orf71Q711Q0 1435 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 CETN3O15182 167 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 TJP3O95049 919 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 MYBL1P10243 752 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 KRT13P13646 458 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 BRAFP15056 766 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 LMNB1P20700 586 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 MARK3P27448 753 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 CACNA2D1P54289 1103 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 RRP1BQ14684 758 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 UBAP2Q5T6F2 1119 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 LCA5Q86VQ0 697 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 ANKRD42Q8N9B4 389 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 SUPT20HQ8NEM7 779 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 SLC30A5Q8TAD4 765 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 UHMK1Q8TAS1 419 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 SLC35G2Q8TBE7 412 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 MIPOL1Q8TD10 442 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 U2AF1L4Q8WU68 220 aaKnown RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 UCMAQ8WVF2 138 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 C7orf43Q8WVR3 580 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 GATA6Q92908 595 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 DNAJC19Q96DA6 116 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 GBP5Q96PP8 586 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 DENND2DQ9H6A0 471 aaPredicted RBP12.05□□□□□ -0.48
PCAT29-201ENST00000558411 LGALS13Q9UHV8 139 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 CHKBQ9Y259 395 aa12.05□□□□□ -0.48
PCAT29-201ENST00000558411 KIAA1551Q9HCM1 1747 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 PCDH11YQ9BZA8 1340 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 MIF4GDA9UHW6 222 aaKnown RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 USP17L12C9JPN9 530 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 USP17L21D6R901 530 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 ACTN1P12814 892 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 KCNA3P22001 575 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 TARSP26639 723 aaKnown RBP12.04□□□□□ -0.48
PCAT29-201ENST00000558411 PON1P27169 355 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 PTPN4P29074 926 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 GNA11P29992 359 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 BCAMP50895 628 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 IL9RQ01113 521 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 RCN2Q14257 317 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 CYP1B1Q16678 543 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 LONRF1Q17RB8 773 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 EXOC3L4Q17RC7 722 aa12.04□□□□□ -0.48
PCAT29-201ENST00000558411 RGS9BPQ6ZS82 235 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms