RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 RAPGEF1Q13905 1077 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 DHX34Q14147 1143 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 TNIP1Q15025 636 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 SLC15A2Q16348 729 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PTPN21Q16825 1174 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 EXOC3L4Q17RC7 722 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 KNOP1Q1ED39 458 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MFSD14BQ5SR56 506 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 DCAF8Q5TAQ9 597 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 KRT26Q7Z3Y9 468 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PEX26Q7Z412 305 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 TMEM110Q86TL2 294 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 GPBP1Q86WP2 473 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MAPKAPK5Q8IW41 473 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RHOT2Q8IXI1 618 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 SP8Q8IXZ3 490 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MYO1HQ8N1T3 1032 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 UBL4BQ8N7F7 174 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 ANKS4BQ8N8V4 417 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 USP38Q8NB14 1042 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 LINC00116Q8NCU8 138 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RASGRP4Q8TDF6 673 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 KAT2BQ92831 832 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 NACC2Q96BF6 587 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 ZNF653Q96CK0 615 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MTMR8Q96EF0 704 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 ACSBG1Q96GR2 724 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 ATP6V1G3Q96LB4 118 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PNMA5Q96PV4 448 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 LRRC1Q9BTT6 524 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 LSM14BQ9BX40 385 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 AMNQ9BXJ7 453 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 TLR10Q9BXR5 811 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 SEZ6LQ9BYH1 1024 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 WDR11Q9BZH6 1224 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 NSRP1Q9H0G5 558 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MRPL46Q9H2W6 279 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 TUFT1Q9NNX1 390 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 OLFML3Q9NRN5 406 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 NYAP2Q9P242 653 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RABL2AQ9UBK7 228 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 BIN2Q9UBW5 565 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 METRNQ9UJH8 293 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 CCNL1Q9UK58 526 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 AMFRQ9UKV5 643 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PCDHB13Q9Y5F0 798 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 CAPN7Q9Y6W3 813 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MYH4Q9Y623 1939 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 GREB1LQ9C091 1923 aaPredicted RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 COL2A1P02458 1487 aaPredicted RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 A6NHS1 94 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 CCDC169A6NNP5 214 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 PP2D1A8MPX8 630 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 MAPK13O15264 365 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 MGEA5O60502 916 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 TOM1O60784 492 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 CLASP2O75122 1294 aaKnown RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 ATP6V1G1O75348 118 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 PALMO75781 387 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 PPP1R37O75864 691 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 SMNDC1O75940 238 aaKnown RBP eCLIP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 ECM2O94769 699 aaPredicted RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 EYA4O95677 639 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 FAM107AO95990 144 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 SSBP05455 408 aaKnown RBP eCLIP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 MAPTP10636 758 aaKnown RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 NR1D1P20393 614 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 S100A1P23297 94 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 NR2F2P24468 414 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 CCNCP24863 283 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 TM4SF1P30408 202 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 TCF7P36402 384 aaPredicted RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 DRG2P55039 364 aaKnown RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 HADHBP55084 474 aaKnown RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 SLC7A5Q01650 507 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 GABPAQ06546 454 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 ENPEPQ07075 957 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 KCNH2Q12809 1159 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 SNX1Q13596 522 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 BYSLQ13895 437 aaKnown RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 HLTFQ14527 1009 aaKnown RBP eCLIP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 LBRQ14739 615 aaKnown RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 ARHGEF6Q15052 776 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 TCEAL1Q15170 157 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 RCN1Q15293 331 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 MAP7D1Q3KQU3 841 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 CCDC153Q494R4 210 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 CCDC14Q49A88 953 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 CRY2Q49AN0 593 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 BOLA3Q53S33 107 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 ODF2Q5BJF6 829 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 SLC27A3Q5K4L6 730 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 KLHDC7AQ5VTJ3 777 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 HGSNATQ68CP4 663 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 THOC7Q6I9Y2 204 aaKnown RBP5.92□□□□□ -1.46
GABPB1-207ENST00000558335 USP17L2Q6R6M4 530 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 PACS1Q6VY07 963 aa5.92□□□□□ -1.46
GABPB1-207ENST00000558335 TAOK1Q7L7X3 1001 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms