RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 PRPF31Q8WWY3 499 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 CASP10Q92851 521 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 KCNH6Q9H252 994 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 FAM105AQ9NUU6 356 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 STK39Q9UEW8 545 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 MUTYHQ9UIF7 546 aa15.22■□□□□ 0.03
SNRPA1-204ENST00000558020 CXCL14O95715 111 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 SRGAP2CP0DJJ0 459 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 YWHABP31946 246 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 CA8P35219 290 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 PBX3P40426 434 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 AK2P54819 239 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 NPEPPSP55786 919 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 CBX2Q14781 532 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 NOMO2Q5JPE7 1267 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 ERICH6BQ5W0A0 696 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 CES5AQ6NT32 575 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 ANKRD54Q6NXT1 300 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 URGCPQ8TCY9 931 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 RPGRIP1Q96KN7 1286 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 DHX33Q9H6R0 707 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 KANSL3Q9P2N6 904 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 PCDHA12Q9UN75 941 aa15.21■□□□□ 0.03
SNRPA1-204ENST00000558020 HIDE1A8MVS5 230 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 ZC3H11AO75152 810 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 LAMTOR4Q0VGL1 99 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 KCNC3Q14003 757 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 MXD4Q14582 209 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 PCBP1Q15365 356 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 XKR9Q5GH70 373 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 NCAPH2Q6IBW4 605 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 LLGL2Q6P1M3 1020 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 TPH2Q8IWU9 490 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 OXER1Q8TDS5 423 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 SUSD6Q92537 303 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 HAS1Q92839 578 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 LXNQ9BS40 222 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 AGPAT5Q9NUQ2 364 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 PCDHB2Q9Y5E7 798 aa15.2■□□□□ 0.02
SNRPA1-204ENST00000558020 C2orf71A6NGG8 1288 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 ALDH2P05091 517 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 ITIH3Q06033 890 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 TFDP1Q14186 410 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 DDX53Q86TM3 631 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 VPS52Q8N1B4 723 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 CNNM3Q8NE01 707 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 VN1R2Q8NFZ6 395 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 TMEM143Q96AN5 459 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 CCDC43Q96MW1 224 aaKnown RBP15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 NECTIN4Q96NY8 510 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 FAM193BQ96PV7 902 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 S1PR5Q9H228 398 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 UBN1Q9NPG3 1134 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 GJB4Q9NTQ9 266 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 RGL1Q9NZL6 768 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 INPP5FQ9Y2H2 1132 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 NR2E1Q9Y466 385 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 TRIOO75962 3097 aa15.19■□□□□ 0.02
SNRPA1-204ENST00000558020 CNTNAP2Q9UHC6 1331 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 NT5C1B-RDH14C9J2C7 533 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 OFD1O75665 1012 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 ERLIN2O94905 339 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 CTDNEP1O95476 244 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 NEK4P51957 841 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 RBM10P98175 930 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 EMC2Q15006 297 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 CALCRLQ16602 461 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 LONRF3Q496Y0 759 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 TRIM67Q6ZTA4 783 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 HFE2Q6ZVN8 426 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 BMP8AQ7Z5Y6 402 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 POTEDQ86YR6 584 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 NECAB1Q8N987 351 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 RNF149Q8NC42 400 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 LPPQ93052 612 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 GTF3C6Q969F1 213 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 IGSF21Q96ID5 467 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 DYDC2Q96IM9 177 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 TBC1D13Q9NVG8 400 aa15.18■□□□□ 0.02
SNRPA1-204ENST00000558020 SLITRK3O94933 977 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 GALTP07902 379 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 AXLP30530 894 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 HOXD11P31277 338 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 ZXDAP98168 799 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 CYP4A11Q02928 519 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 POU5F1BQ06416 359 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 NR5A1Q13285 461 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 CTTNQ14247 550 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 SAFBQ15424 915 aaKnown RBP eCLIP15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 SYCE2Q6PIF2 218 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 FERMT3Q86UX7 667 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 PPFIBP1Q86W92 1011 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 PBXIP1Q96AQ6 731 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 RIPOR3Q96MK2 946 aa15.17■□□□□ 0.02
SNRPA1-204ENST00000558020 MTRQ99707 1265 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms