RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 NOLC1Q14978 699 aaKnown RBP eCLIP8.14□□□□□ -1.11
SPG11-204ENST00000557866 STXBP2Q15833 593 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 CCL15Q16663 113 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 FILIP1LQ4L180 1135 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 MIIPQ5JXC2 388 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 ABHD15Q6UXT9 468 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 SEPT14Q6ZU15 432 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 ANKRD23Q86SG2 305 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 CREBRFQ8IUR6 639 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 TMEM139Q8IV31 216 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 C2orf69Q8N8R5 385 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 TC2NQ8N9U0 490 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 RDM1Q8NG50 284 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 CDHR1Q96JP9 859 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 CNOT6LQ96LI5 555 aaKnown RBP8.14□□□□□ -1.11
SPG11-204ENST00000557866 MMP19Q99542 508 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 SH2D3AQ9BRG2 576 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 IKZF4Q9H2S9 585 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 EFCC1Q9HA90 598 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 JPH1Q9HDC5 661 aaPredicted RBP8.14□□□□□ -1.11
SPG11-204ENST00000557866 CUEDC1Q9NWM3 386 aaPredicted RBP8.14□□□□□ -1.11
SPG11-204ENST00000557866 DOLKQ9UPQ8 538 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 SLC45A1Q9Y2W3 748 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 SAMM50Q9Y512 469 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 COL4A3BPQ9Y5P4 624 aa8.14□□□□□ -1.11
SPG11-204ENST00000557866 ITIH6Q6UXX5 1313 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 B4DLN1 442 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 RNF225M0QZC1 329 aaPredicted RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 HIP1RO75146 1068 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 TBCAO75347 108 aaKnown RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 ATG7O95352 703 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 ARIH2O95376 493 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 ATP4AP20648 1035 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 SFPQP23246 707 aaKnown RBP eCLIP8.13□□□□□ -1.11
SPG11-204ENST00000557866 NMT1P30419 496 aaKnown RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 SOX11P35716 441 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 ADKP55263 362 aaKnown RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 NPEPPSP55786 919 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 UBXN1Q04323 297 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 RBL2Q08999 1139 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 KNOP1Q1ED39 458 aaKnown RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 GNPTABQ3T906 1256 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 UTP14CQ5TAP6 766 aaKnown RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 PLA2G4FQ68DD2 849 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 SWSAP1Q6NVH7 229 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 RIPOR1Q6ZS17 1223 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 ANO5Q75V66 913 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 CYFIP1Q7L576 1253 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 TAS1R3Q7RTX0 852 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 ZNF720Q7Z2F6 126 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 KSR1Q8IVT5 923 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 CCDC60Q8IWA6 550 aaPredicted RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 SMAP1Q8IYB5 467 aaPredicted RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 MYCT1Q8N699 235 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 ANKRD13CQ8N6S4 541 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 SHCBP1Q8NEM2 672 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 GPRC5AQ8NFJ5 357 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 MORC4Q8TE76 937 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 ZNF526Q8TF50 670 aaPredicted RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 PCYT2Q99447 389 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 GAS2L1Q99501 681 aaPredicted RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 TSG101Q99816 390 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 TUBGCP2Q9BSJ2 902 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 STRA6Q9BX79 667 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 MROH8Q9H579 483 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 MRPL44Q9H9J2 332 aaKnown RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 PARVGQ9HBI0 331 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 TIMMDC1Q9NPL8 285 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 OLFML3Q9NRN5 406 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 RAB6BQ9NRW1 208 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 ANKEF1Q9NU02 776 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 KCND2Q9NZV8 630 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 MAGEC2Q9UBF1 373 aaPredicted RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 GABBR1Q9UBS5 961 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 SLC9A2Q9UBY0 812 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 PCDHA10Q9Y5I2 948 aa8.13□□□□□ -1.11
SPG11-204ENST00000557866 COL11A1P12107 1806 aaPredicted RBP8.13□□□□□ -1.11
SPG11-204ENST00000557866 SYNGAP1Q96PV0 1343 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 GSTTP1A0A1W2PQM5 241 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 TGFB1I1O43294 461 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 USO1O60763 962 aaKnown RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 GCNT3O95395 438 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 FGFR1OPO95684 399 aaKnown RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 IL2RAP01589 272 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 GYPCP04921 128 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 PSAPP07602 524 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 SUPT20HL2P0C7V6 817 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 UBA1P22314 1058 aaKnown RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 MTIF2P46199 727 aaKnown RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 KLK7P49862 253 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 FXR1P51114 621 aaKnown RBP eCLIP8.12□□□□□ -1.11
SPG11-204ENST00000557866 FKBP3Q00688 224 aaKnown RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 SP4Q02446 784 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 SRSF11Q05519 484 aaKnown RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 DBN1Q16643 649 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 EDRF1Q3B7T1 1238 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 VWA3BQ502W6 1294 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 ZC2HC1CQ53FD0 456 aaPredicted RBP8.12□□□□□ -1.11
SPG11-204ENST00000557866 TMEM63BQ5T3F8 832 aa8.12□□□□□ -1.11
SPG11-204ENST00000557866 MAEAQ7L5Y9 396 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms