RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 EOMESO95936 686 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 CLCN3P51790 818 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 PRKCEQ02156 737 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 ITIH3Q06033 890 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 TCF15Q12870 199 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 GNL2Q13823 731 aaKnown RBP18.61■□□□□ 0.57
NEK9-211ENST00000557673 BECN1Q14457 450 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 SMC1AQ14683 1233 aaKnown RBP18.61■□□□□ 0.57
NEK9-211ENST00000557673 SYCE2Q6PIF2 218 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 LRRC55Q6ZSA7 311 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 ECHDC2Q86YB7 292 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 SCLT1Q96NL6 688 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 PHOX2BQ99453 314 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 MRPL9Q9BYD2 267 aaKnown RBP18.61■□□□□ 0.57
NEK9-211ENST00000557673 ADAMTS10Q9H324 1103 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 DACT1Q9NYF0 836 aa18.61■□□□□ 0.57
NEK9-211ENST00000557673 VPS37CA5D8V6 355 aaPredicted RBP18.6■□□□□ 0.57
NEK9-211ENST00000557673 HIDE1A8MVS5 230 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 WNT7AO00755 349 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 SYT1P21579 422 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 AVPR2P30518 371 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 SFNP31947 248 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 ALDH7A1P49419 539 aaKnown RBP18.6■□□□□ 0.57
NEK9-211ENST00000557673 JAK3P52333 1124 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 CDC42EP1Q00587 391 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 PPP4R3AQ6IN85 833 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 MIER3Q7Z3K6 550 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 UBALD2Q8IYN6 164 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 MRPL43Q8N983 215 aaKnown RBP18.6■□□□□ 0.57
NEK9-211ENST00000557673 RNF169Q8NCN4 708 aa18.6■□□□□ 0.57
NEK9-211ENST00000557673 NAP1L4Q99733 375 aaKnown RBP18.6■□□□□ 0.57
NEK9-211ENST00000557673 A0A0U1RQF3 1178 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 OATP04181 439 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 MCTP1Q6DN14 999 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 B3GNT9Q6UX72 402 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 LINC01465Q8N7H1 131 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 TMEM87AQ8NBN3 555 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 ADAM7Q9H2U9 754 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 TSHZ2Q9NRE2 1034 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 RNF19AQ9NV58 838 aa18.59■□□□□ 0.57
NEK9-211ENST00000557673 CCNT1O60563 726 aaKnown RBP18.58■□□□□ 0.56
NEK9-211ENST00000557673 DARSP14868 501 aaKnown RBP18.58■□□□□ 0.56
NEK9-211ENST00000557673 TBC1D8BQ0IIM8 1120 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 MTMR3Q13615 1198 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 SLC39A11Q8N1S5 342 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 LRRC71Q8N4P6 559 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 RDM1Q8NG50 284 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 NLRP7Q8WX94 980 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 ATOH1Q92858 354 aaPredicted RBP18.58■□□□□ 0.56
NEK9-211ENST00000557673 RIPOR3Q96MK2 946 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 APOL5Q9BWW9 433 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 KCNMB3Q9NPA1 279 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 CHST12Q9NRB3 414 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 SORCS3Q9UPU3 1222 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 HCFC2Q9Y5Z7 792 aa18.58■□□□□ 0.56
NEK9-211ENST00000557673 C2orf71A6NGG8 1288 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 PBX3P40426 434 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 MTHFRP42898 656 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 TRAPPC10P48553 1259 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 GPC3P51654 580 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 VCPP55072 806 aaKnown RBP18.57■□□□□ 0.56
NEK9-211ENST00000557673 CLLU1OSQ5K130 101 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 SPRYD3Q8NCJ5 442 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 KREMEN2Q8NCW0 462 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 TMEM169Q96HH4 297 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 VAV3Q9UKW4 847 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 NOL7Q9UMY1 257 aaKnown RBP18.57■□□□□ 0.56
NEK9-211ENST00000557673 MTMR6Q9Y217 621 aa18.57■□□□□ 0.56
NEK9-211ENST00000557673 CACNA1HO95180 2353 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 TMEM150BA6NC51 233 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 EML1O00423 815 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 STX6O43752 255 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 NEMFO60524 1076 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 SKIP12755 728 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 SP100P23497 879 aaPredicted RBP18.56■□□□□ 0.56
NEK9-211ENST00000557673 CA8P35219 290 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 DNM2P50570 870 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 ORC2Q13416 577 aaPredicted RBP18.56■□□□□ 0.56
NEK9-211ENST00000557673 GIT2Q14161 759 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 TTC38Q5R3I4 469 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 ZNF598Q86UK7 904 aaKnown RBP18.56■□□□□ 0.56
NEK9-211ENST00000557673 HELQQ8TDG4 1101 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 GCOM2Q9BZD3 368 aaPredicted RBP18.56■□□□□ 0.56
NEK9-211ENST00000557673 DZANK1Q9NVP4 752 aa18.56■□□□□ 0.56
NEK9-211ENST00000557673 SEPT9Q9UHD8 586 aaPredicted RBP18.56■□□□□ 0.56
NEK9-211ENST00000557673 GFRA3O60609 400 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 CLASP2O75122 1294 aaKnown RBP18.55■□□□□ 0.56
NEK9-211ENST00000557673 STBD1O95210 358 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 CXCL14O95715 111 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 BCAR1P56945 870 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 RESTQ13127 1097 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 PPP2R5CQ13362 524 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 BRAPQ7Z569 592 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 FERMT3Q86UX7 667 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 HAS1Q92839 578 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 FAM20AQ96MK3 541 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 INO80BQ9C086 356 aaPredicted RBP18.55■□□□□ 0.56
NEK9-211ENST00000557673 STK39Q9UEW8 545 aa18.55■□□□□ 0.56
NEK9-211ENST00000557673 TBX3O15119 743 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms