RNA–Protein interactions for RNA: ENST00000557380.5

NEMF-215, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 1,742 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-215ENST00000557380 ANKRD35Q8N283 1001 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 RNF10Q8N5U6 811 aaKnown RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 MCPH1Q8NEM0 835 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 SIX2Q9NPC8 291 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 SCN4AP35499 1836 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 IGKV6D-21A0A0A0MT36 114 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 LOC102724159A0A0B4J2E5 919 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 RCCD1A6NED2 376 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 H0YCG3 227 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 EXOC3O60645 756 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 N4BP1O75113 896 aaKnown RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 GFPT2O94808 682 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 TGFB3P10600 412 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 H2AFXP16104 143 aaPredicted RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 MAGEA1P43355 309 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 JAM2P57087 298 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 CYP27A1Q02318 531 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 BFSP1Q12934 665 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 HSP90AA2PQ14568 343 aaPredicted RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 PWP2Q15269 919 aaKnown RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 SLC18A3Q16572 532 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 ERCC6LQ2NKX8 1250 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 XKR3Q5GH77 459 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 UTP14CQ5TAP6 766 aaKnown RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 GADL1Q6ZQY3 521 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 FASTKD5Q7L8L6 764 aaKnown RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 TRAPPC11Q7Z392 1133 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 IRF2BP2Q7Z5L9 587 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 KSR1Q8IVT5 923 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 GPR161Q8N6U8 529 aaKnown RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 FAM133AQ8N9E0 248 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 LRRN4CLQ8ND94 238 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 TMEM161BQ8NDZ6 487 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 TRIM58Q8NG06 486 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 RABGGTAQ92696 567 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 GOLGA1Q92805 767 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 SECISBP2LQ93073 1101 aaKnown RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 VTI1AQ96AJ9 217 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 CEP170P1Q96L14 293 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 ASCC2Q9H1I8 757 aaPredicted RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 ELP3Q9H9T3 547 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 GCNT4Q9P109 453 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 TRIM10Q9UDY6 481 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 USP20Q9Y2K6 914 aa9.36□□□□□ -0.91
NEMF-215ENST00000557380 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 MYH9P35579 1960 aaKnown RBP9.36□□□□□ -0.91
NEMF-215ENST00000557380 BTNL10A8MVZ5 291 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 TACC1O75410 805 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 CNMDO75829 334 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 KRT13P13646 458 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 CYP2J2P51589 502 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 NPEPPSP55786 919 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 PEX3P56589 373 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 KLHL30Q0D2K2 578 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 DMP1Q13316 513 aaPredicted RBP9.35□□□□□ -0.91
NEMF-215ENST00000557380 MOGSQ13724 837 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 RAPGEF1Q13905 1077 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 TDRD12Q587J7 1177 aaKnown RBP9.35□□□□□ -0.91
NEMF-215ENST00000557380 FAM102BQ5T8I3 360 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 PLA2G4FQ68DD2 849 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 SWSAP1Q6NVH7 229 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 ARMC9Q7Z3E5 817 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 MAP4K3Q8IVH8 894 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 CCDC60Q8IWA6 550 aaPredicted RBP9.35□□□□□ -0.91
NEMF-215ENST00000557380 XXYLT1Q8NBI6 393 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 GTF3C2Q8WUA4 911 aaPredicted RBP9.35□□□□□ -0.91
NEMF-215ENST00000557380 SPAG5Q96R06 1193 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 MPHOSPH6Q99547 160 aaKnown RBP9.35□□□□□ -0.91
NEMF-215ENST00000557380 IKZF4Q9H2S9 585 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 CYP26B1Q9NR63 512 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 TBX20Q9UMR3 447 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 PPME1Q9Y570 386 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 FHOD1Q9Y613 1164 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 SYNGAP1Q96PV0 1343 aa9.35□□□□□ -0.91
NEMF-215ENST00000557380 TMEM150BA6NC51 233 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 SOWAHBA6NEL2 793 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 GLTPD2A6NH11 291 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 ACTN1P12814 892 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 PRLRP16471 622 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 FERP16591 822 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 OSBPP22059 807 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 NPTX2P47972 431 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 PRKCEQ02156 737 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 CNTN2Q02246 1040 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 NEDD9Q14511 834 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 LDLRAD1Q5T700 205 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 KCNV1Q6PIU1 500 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 DLK2Q6UY11 383 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 MAEAQ7L5Y9 396 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
NEMF-215ENST00000557380 RPGRIP1Q96KN7 1286 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 NIFKQ9BYG3 293 aaKnown RBP9.34□□□□□ -0.91
NEMF-215ENST00000557380 STK33Q9BYT3 514 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 ATP6V0A4Q9HBG4 840 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 GPRC5CQ9NQ84 441 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 HSPBP1Q9NZL4 362 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.34□□□□□ -0.91
NEMF-215ENST00000557380 JRKLQ9Y4A0 524 aa9.34□□□□□ -0.91
NEMF-215ENST00000557380 SAR1BQ9Y6B6 198 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms