RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 VPS13AQ96RL7 3174 aa12.57□□□□□ -0.4
HNRNPC-231ENST00000557336 CFAP54Q96N23 3096 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 ZFHX2Q9C0A1 2572 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 A0A087WZ62 844 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 EPB41L2O43491 1005 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 B4GALT3O60512 393 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 MAFO75444 373 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 REC8O95072 547 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 EOMESO95936 686 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 ZXDAP98168 799 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 NHLH1Q02575 133 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 SSRP1Q08945 709 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 MTERF2Q49AM1 385 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 ANKRD54Q6NXT1 300 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 MOXD1Q6UVY6 613 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 MIER3Q7Z3K6 550 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 BMP8AQ7Z5Y6 402 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 LRRC43Q8N309 656 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 MRPL43Q8N983 215 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 RNF169Q8NCN4 708 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 FEZF2Q8TBJ5 459 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 HELQQ8TDG4 1101 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 BCL7CQ8WUZ0 217 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 RPGRIP1Q96KN7 1286 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 ZNF558Q96NG5 402 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 FDXACB1Q9BRP7 624 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 SPG21Q9NZD8 308 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 TCEAL9Q9UHQ7 104 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 KCNJ14Q9UNX9 436 aa12.56□□□□□ -0.4
HNRNPC-231ENST00000557336 C2orf71A6NGG8 1288 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 NT5C1B-RDH14C9J2C7 533 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 HOXA2O43364 376 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 DEXIO95424 95 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 TECP42680 631 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 PHKA2P46019 1235 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 AFF1P51825 1210 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 FOSBP53539 338 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 BCAR1P56945 870 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 STK3Q13188 491 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 INF2Q27J81 1249 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 PLA2G4FQ68DD2 849 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 LLGL2Q6P1M3 1020 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 ALYREFQ86V81 257 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 ZNF687Q8N1G0 1237 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 NLRP7Q8WX94 980 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 DDX12PQ92771 950 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 HAS1Q92839 578 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 LPPQ93052 612 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 ASIC4Q96FT7 647 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 VN1R3Q9BXE9 311 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 IFT122Q9HBG6 1241 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 KCNMB3Q9NPA1 279 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 NGRNQ9NPE2 291 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 SUCLA2Q9P2R7 463 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 SEPT9Q9UHD8 586 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 PUF60Q9UHX1 559 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 CYP46A1Q9Y6A2 500 aa12.55□□□□□ -0.4
HNRNPC-231ENST00000557336 TMEM221A6NGB7 291 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 DDX11L8A8MPP1 907 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 M0R296 226 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 CLASP2O75122 1294 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 CTDNEP1O95476 244 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 NPEPPSP55786 919 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 SCRN1Q12765 414 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 LONRF3Q496Y0 759 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 TMC7Q7Z402 723 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 TRIM22Q8IYM9 498 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 ABI1Q8IZP0 508 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 PRSS33Q8NF86 280 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 KCNH6Q9H252 994 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 MINDY3Q9H8M7 445 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 ENTPD7Q9NQZ7 604 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 CHST12Q9NRB3 414 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 DDX25Q9UHL0 483 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 PCDHGA10Q9Y5H3 936 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 HCFC2Q9Y5Z7 792 aa12.54□□□□□ -0.4
HNRNPC-231ENST00000557336 ZBTB39O15060 712 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 ZNF623O75123 536 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 OFD1O75665 1012 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 PPM1AP35813 382 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 KRT17Q04695 432 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 SPIRE1Q08AE8 756 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 PPP2R5CQ13362 524 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 NONOQ15233 471 aaKnown RBP eCLIP12.53□□□□□ -0.48e-7■□□□□ 9.3
HNRNPC-231ENST00000557336 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 KANK3Q6NY19 840 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 RHPN2Q8IUC4 686 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 FAM177A1Q8N128 213 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 AUTS2Q8WXX7 1259 aa12.53□□□□□ -0.4
HNRNPC-231ENST00000557336 MFSD14AQ96MC6 490 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms