RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 NPY5RQ15761 445 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 UGCGQ16739 394 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 PPP4R3AQ6IN85 833 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 PIK3AP1Q6ZUJ8 805 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 EXOC8Q8IYI6 725 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 ABI1Q8IZP0 508 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 CYP4X1Q8N118 509 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 LRRC71Q8N4P6 559 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 ETNPPLQ8TBG4 499 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 TMEM40Q8WWA1 233 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 GJA10Q969M2 543 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 PABPC5Q96DU9 382 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 THAP11Q96EK4 314 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 FAM20AQ96MK3 541 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 GCOM2Q9BZD3 368 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 INO80BQ9C086 356 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 ELAC1Q9H777 363 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 TMEM161AQ9NX61 479 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 TOR4AQ9NXH8 423 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 CLDND1Q9NY35 253 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 LIMD1Q9UGP4 676 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 PCDHB12Q9Y5F1 795 aa8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 MRPL42Q9Y6G3 142 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 FNDC1Q4ZHG4 1894 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-226ENST00000556628 C9IYK1 514 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 TBX3O15119 743 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 SLC37A4O43826 429 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 MGEA5O60502 916 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 DARSP14868 501 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 NDUFV2P19404 249 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 QARSP47897 775 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 GPC3P51654 580 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 PPP2R5CQ13362 524 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 ME3Q16798 604 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 CSPP1Q1MSJ5 1256 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 LEXMQ3ZCV2 418 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 PTCRAQ6ISU1 281 aaPredicted RBP8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 SLFN12Q8IYM2 578 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 NECAB1Q8N987 351 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 POF1BQ8WVV4 589 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 GTF3C6Q969F1 213 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 NECAB3Q96P71 396 aaPredicted RBP8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 NIFKQ9BYG3 293 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 ADAMTS10Q9H324 1103 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 ALG13Q9NP73 1137 aaKnown RBP8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 DACT1Q9NYF0 836 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 PLAGL2Q9UPG8 496 aa8.62□□□□□ -1.03
HNRNPC-226ENST00000556628 ATG2AQ2TAZ0 1938 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 H3BQ06 376 aaPredicted RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 AXIN1O15169 862 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 CTDNEP1O95476 244 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 ITGB1P05556 798 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 P4HBP07237 508 aaKnown RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 LINC00271P0C7V0 271 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 LAG3P18627 525 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 SFPQP23246 707 aaKnown RBP eCLIP8.61□□□□□ -1.039e-7■■■□□ 16.4
HNRNPC-226ENST00000556628 GATMP50440 423 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 POLGP54098 1239 aaPredicted RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 EPHA7Q15375 998 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 SAFBQ15424 915 aaKnown RBP eCLIP8.61□□□□□ -1.032e-10■□□□□ 9.6
HNRNPC-226ENST00000556628 TARBP2Q15633 366 aaKnown RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 CTC1Q2NKJ3 1217 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 NCAPH2Q6IBW4 605 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 B3GNT9Q6UX72 402 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 OTUD6AQ7L8S5 288 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 ZNF410Q86VK4 478 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 RHPN2Q8IUC4 686 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 THNSL1Q8IYQ7 743 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 LINC01465Q8N7H1 131 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 KLHL23Q8NBE8 558 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 RNF169Q8NCN4 708 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 SLC7A3Q8WY07 619 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 ZNF668Q96K58 619 aaPredicted RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 CEP170P1Q96L14 293 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 SH2D3AQ9BRG2 576 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 C1QTNF1Q9BXJ1 281 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 TMEM117Q9H0C3 514 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 IGFLR1Q9H665 355 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 KCNMB3Q9NPA1 279 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 GJB4Q9NTQ9 266 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 SUCLA2Q9P2R7 463 aaPredicted RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 PUF60Q9UHX1 559 aaKnown RBP8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 PPME1Q9Y570 386 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 UNC80Q8N2C7 3258 aa8.61□□□□□ -1.03
HNRNPC-226ENST00000556628 PLXNA4Q9HCM2 1894 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 A0A087WZ62 844 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 FSD2A1L4K1 749 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 TMEM150BA6NC51 233 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 SPTLC1O15269 473 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 GAS2O43903 313 aaKnown RBP8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 DTNBO60941 627 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 MAFO75444 373 aaPredicted RBP8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 EOMESO95936 686 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 FGFR1P11362 822 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 SKIP12755 728 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 FGFR4P22455 802 aa8.6□□□□□ -1.03
HNRNPC-226ENST00000556628 NDUFV1P49821 464 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms