RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 ZNF280AP59817 542 aaPredicted RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 AMPD3Q01432 767 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 NCBP1Q09161 790 aaKnown RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 LRMPQ12912 555 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 PTPAQ15257 358 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 IFIT1BQ5T764 474 aaKnown RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 IQCEQ6IPM2 695 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 CCDC70Q6NSX1 233 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 ZNF574Q6ZN55 896 aaPredicted RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 KRT26Q7Z3Y9 468 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 WFDC3Q8IUB2 231 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 TMTC1Q8IUR5 882 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 FAM114A1Q8IWE2 563 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 ZNF654Q8IZM8 581 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 DNAJC5GQ8N7S2 189 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 CCDC148Q8NFR7 591 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 RPGRIP1Q96KN7 1286 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 PPP1R13BQ96KQ4 1090 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 GMLQ99445 158 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 RSRP1Q9BUV0 290 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 GLIS2Q9BZE0 524 aaPredicted RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 CRNKL1Q9BZJ0 848 aaKnown RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 TMX1Q9H3N1 280 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 ZNF408Q9H9D4 720 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 ARPP21Q9UBL0 812 aaPredicted RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 NRBP1Q9UHY1 535 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 ABT1Q9ULW3 272 aaKnown RBP6.84□□□□□ -1.31
CPSF2-205ENST00000556622 TACC3Q9Y6A5 838 aa6.84□□□□□ -1.31
CPSF2-205ENST00000556622 ITIH6Q6UXX5 1313 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 PASKQ96RG2 1323 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 RBM47A0AV96 593 aaKnown RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 FARP2O94887 1054 aaPredicted RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 CELF2O95319 508 aaKnown RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 BAG3O95817 575 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 ZNF16P17020 682 aaPredicted RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 MARCKSP29966 332 aaPredicted RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 LONP1P36776 959 aaKnown RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 SARSP49591 514 aaKnown RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 LIG3P49916 1009 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 PTPN11Q06124 597 aaPredicted RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 PPARAQ07869 468 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 MORC3Q14149 939 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 TTLL4Q14679 1199 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 DLGAP5Q15398 846 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 NTRK3Q16288 839 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 DEFB115Q30KQ5 88 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 NBPF9Q3BBW0 867 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 CCDC144BQ3MJ40 725 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 MFSD14BQ5SR56 506 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 ANGEL2Q5VTE6 544 aaKnown RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 SHC4Q6S5L8 630 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 CYFIP1Q7L576 1253 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 CCDC84Q86UT8 332 aaPredicted RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 CCDC144CPQ8IYA2 1237 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 SMYD4Q8IYR2 804 aaPredicted RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 MSL3Q8N5Y2 521 aaKnown RBP6.83□□□□□ -1.32
CPSF2-205ENST00000556622 GIPC2Q8TF65 315 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 NUP58Q9BVL2 599 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 TSPYL1Q9H0U9 437 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 RAI14Q9P0K7 980 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 PCOLCE2Q9UKZ9 415 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 PCDHA5Q9Y5H7 936 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 SNCAIPQ9Y6H5 919 aa6.83□□□□□ -1.32
CPSF2-205ENST00000556622 SCN9AQ15858 1988 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 FAM205AQ6ZU69 1335 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 IRS2Q9Y4H2 1338 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 BICDL2A1A5D9 508 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 GSG1L2A8MUP6 293 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 hCG_1984214I3L0E3 225 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 POLR2DO15514 142 aaKnown RBP6.82□□□□□ -1.32
CPSF2-205ENST00000556622 ORC4O43929 436 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 WDHD1O75717 1129 aaPredicted RBP6.82□□□□□ -1.32
CPSF2-205ENST00000556622 FGRP09769 529 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 CYP7A1P22680 504 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 SMARCA1P28370 1054 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 FKBP1AP62942 108 aaKnown RBP6.82□□□□□ -1.32
CPSF2-205ENST00000556622 KRT83P78385 493 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 NCAPHQ15003 741 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 BRD3Q15059 726 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 MAP9Q49MG5 647 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 CST9Q5W186 159 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 OGFOD3Q6PK18 319 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 DLK2Q6UY11 383 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 CYB5R4Q7L1T6 521 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 ZNF771Q7L3S4 317 aaPredicted RBP6.82□□□□□ -1.32
CPSF2-205ENST00000556622 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 CERS5Q8N5B7 392 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 PDILTQ8N807 584 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 ZNF713Q8N859 430 aaPredicted RBP6.82□□□□□ -1.32
CPSF2-205ENST00000556622 SPATA20Q8TB22 786 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 TBC1D22AQ8WUA7 517 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 RABGGTAQ92696 567 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 GOLGA1Q92805 767 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 AK8Q96MA6 479 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 NAP1L4Q99733 375 aaKnown RBP6.82□□□□□ -1.32
CPSF2-205ENST00000556622 RAB34Q9BZG1 259 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 ARFGAP3Q9NP61 516 aa6.82□□□□□ -1.32
CPSF2-205ENST00000556622 PIH1D3Q9NQM4 214 aaKnown RBP6.82□□□□□ -1.32
CPSF2-205ENST00000556622 CWC15Q9P013 229 aaKnown RBP6.82□□□□□ -1.32
CPSF2-205ENST00000556622 CALCOCO1Q9P1Z2 691 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms