RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 NRP2O60462 931 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 KATNA1O75449 491 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 FSBPO95073 299 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 LY86O95711 162 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 SYN1P17600 705 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 CR2P20023 1033 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 ATP2C1P98194 919 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-221ENST00000556534 CD69Q07108 199 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 KLF1Q13351 362 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-221ENST00000556534 ACAP1Q15027 740 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 MAN2A1Q16706 1144 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 INAVAQ3KP66 663 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 GLB1LQ6UWU2 654 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 KCNK18Q7Z418 384 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 CIR1Q86X95 450 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-221ENST00000556534 GLB1L2Q8IW92 636 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 PLA2G15Q8NCC3 412 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 TSPEARQ8WU66 669 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 SLC6A15Q9H2J7 730 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 DPP7Q9UHL4 492 aa6.3□□□□□ -1.4
SCFD1-221ENST00000556534 CNOT11Q9UKZ1 510 aaKnown RBP6.3□□□□□ -1.4
SCFD1-221ENST00000556534 NOP58Q9Y2X3 529 aaKnown RBP6.3□□□□□ -1.4
SCFD1-221ENST00000556534 WASHC2AQ641Q2 1341 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 A0A1W2PR48 441 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 ALG1L2C9J202 215 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 CDC14BO60729 498 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 TMEM127O75204 238 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 TOX4O94842 621 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 IARSP41252 1262 aaKnown RBP6.29□□□□□ -1.4
SCFD1-221ENST00000556534 BPIFB4P59827 614 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 MRPS9P82933 396 aaKnown RBP6.29□□□□□ -1.4
SCFD1-221ENST00000556534 SRSF2Q01130 221 aaKnown RBP6.29□□□□□ -1.4
SCFD1-221ENST00000556534 MGAT5Q09328 741 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 RIN1Q13671 783 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 SPIDRQ14159 915 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 TCTN3Q6NUS6 607 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 GPR135Q8IZ08 494 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 RABGGTAQ92696 567 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 RAX2Q96IS3 184 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 GPHA2Q96T91 129 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 PLA2G12BQ9BX93 195 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 KRTAP4-9Q9BYQ8 210 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 C14orf93Q9H972 538 aaKnown RBP6.29□□□□□ -1.4
SCFD1-221ENST00000556534 AGO3Q9H9G7 860 aaKnown RBP6.29□□□□□ -1.4
SCFD1-221ENST00000556534 TRHDEQ9UKU6 1024 aa6.29□□□□□ -1.4
SCFD1-221ENST00000556534 PATE3B3GLJ2 98 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 K7ESM1 405 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 MTSS1O43312 755 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 FOXS1O43638 330 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 VSIG10L2P0DP72 767 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 XPAP23025 273 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-221ENST00000556534 MTNR1BP49286 362 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 NRG3P56975 720 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 MUM1Q2TAK8 710 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 GAGE13Q4V321 117 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 TOR2AQ5JU69 321 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 SYDE2Q5VT97 1194 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 ERICH6BQ5W0A0 696 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 LMBR1LQ6UX01 489 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 ADGRE4PQ86SQ3 457 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 TAX1BP1Q86VP1 789 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 ANKRD53Q8N9V6 530 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 SHCBP1Q8NEM2 672 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 AUTS2Q8WXX7 1259 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 MTMR8Q96EF0 704 aa6.28□□□□□ -1.4
SCFD1-221ENST00000556534 C12orf65Q9H3J6 166 aaKnown RBP6.28□□□□□ -1.4
SCFD1-221ENST00000556534 TRIM75PA6NK02 468 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 GABRDO14764 452 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 DAPK3O43293 454 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 IBSPP21815 317 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-221ENST00000556534 KIR2DL3P43628 341 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 PLP2Q04941 152 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 ICAM4Q14773 271 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 ABCB5Q2M3G0 1257 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 FUKQ8N0W3 1084 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 MSL3Q8N5Y2 521 aaKnown RBP6.27□□□□□ -1.41
SCFD1-221ENST00000556534 GIMAP8Q8ND71 665 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-221ENST00000556534 SAMD11Q96NU1 681 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 UIMC1Q96RL1 719 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 CCDC8Q9H0W5 538 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-221ENST00000556534 CD248Q9HCU0 757 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 SLC30A1Q9Y6M5 507 aa6.27□□□□□ -1.41
SCFD1-221ENST00000556534 hCG_2014768A0A024R1R8 64 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 FZD9O00144 591 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 RAD17O75943 681 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 ALDH1A2O94788 518 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 JUNP05412 331 aaKnown RBP6.26□□□□□ -1.41
SCFD1-221ENST00000556534 MEF2AQ02078 507 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-221ENST00000556534 EFEMP1Q12805 493 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 TTC9BQ8N6N2 239 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 RPL10LQ96L21 214 aaKnown RBP6.26□□□□□ -1.41
SCFD1-221ENST00000556534 OR14A2Q96R54 314 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 ASPSCR1Q9BZE9 553 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 IFT122Q9HBG6 1241 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 ZNF277Q9NRM2 450 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-221ENST00000556534 DNAJC28Q9NX36 388 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 ING3Q9NXR8 418 aa6.26□□□□□ -1.41
SCFD1-221ENST00000556534 ZFR2Q9UPR6 939 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms